Gene : AT5G09770 A. thaliana TAIR10
Defline:  (1 of 3) K02879 - large subunit ribosomal protein L17 (RP-L17, MRPL17, rplQ) Genomic Order:  891
Name:  ? AT5G09770 Secondary Identifier:  ? PAC:19671226
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09770 0.5kb upstream 0.5kb upstream 2022 true Chr5: 3035040-3037061 Arabidopsis thaliana
AT5G09770 0.5kb upstream 0.5kb upstream 500 false Chr5: 3036562-3037061 Arabidopsis thaliana
AT5G09770 0.5kb downstream 0.5kb downstream 2022 true Chr5: 3034540-3036561 Arabidopsis thaliana
AT5G09770 0.5kb downstream 0.5kb downstream 500 false Chr5: 3034540-3035039 Arabidopsis thaliana
AT5G09770 1.0kb upstream 1.0kb upstream 2522 true Chr5: 3035040-3037561 Arabidopsis thaliana
AT5G09770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3036562-3037561 Arabidopsis thaliana
AT5G09770 1.0kb downstream 1.0kb downstream 2522 true Chr5: 3034040-3036561 Arabidopsis thaliana
AT5G09770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3034040-3035039 Arabidopsis thaliana
AT5G09770 2.0kb upstream 2.0kb upstream 3522 true Chr5: 3035040-3038561 Arabidopsis thaliana
AT5G09770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3036562-3038561 Arabidopsis thaliana
AT5G09770 2.0kb downstream 2.0kb downstream 3522 true Chr5: 3033040-3036561 Arabidopsis thaliana
AT5G09770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3033040-3035039 Arabidopsis thaliana
AT5G09770 5.0kb upstream 5.0kb upstream 6522 true Chr5: 3035040-3041561 Arabidopsis thaliana
AT5G09770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3036562-3041561 Arabidopsis thaliana
AT5G09770 5.0kb downstream 5.0kb downstream 6522 true Chr5: 3030040-3036561 Arabidopsis thaliana
AT5G09770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3030040-3035039 Arabidopsis thaliana
AT5G09770 10.0kb upstream 10.0kb upstream 11522 true Chr5: 3035040-3046561 Arabidopsis thaliana
AT5G09770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3036562-3046561 Arabidopsis thaliana
AT5G09770 10.0kb downstream 10.0kb downstream 11522 true Chr5: 3025040-3036561 Arabidopsis thaliana
AT5G09770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3025040-3035039 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378834 5261 Brassicaceae View MSA
123832255 5264 Brassicales-Malvales View MSA
124343042 5266 SBM View MSA
124243000 5268 Malvidae View MSA
124060746 5270 Rosid View MSA
123739029 5271 Pentapetalae View MSA
122790801 5272 Eudicot View MSA
122045514 5273 Angiosperm View MSA
121347003 5274 Embryophyte View MSA
123426570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.151       Low
cufflinks 19.247        
cufflinks 11.136        
cufflinks 18.477        
cufflinks 12.409        
cufflinks 18.763        

0 Strain