Gene : AT5G09670 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31827//PTHR31827:SF1 - FAMILY NOT NAMED // EMB|CAB89363.1 Genomic Order:  880
Name:  ? AT5G09670 Secondary Identifier:  ? PAC:19669909
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09670 0.5kb upstream 0.5kb upstream 3521 true Chr5: 2995912-2999432 Arabidopsis thaliana
AT5G09670 0.5kb upstream 0.5kb upstream 500 false Chr5: 2998933-2999432 Arabidopsis thaliana
AT5G09670 0.5kb downstream 0.5kb downstream 3521 true Chr5: 2995412-2998932 Arabidopsis thaliana
AT5G09670 0.5kb downstream 0.5kb downstream 500 false Chr5: 2995412-2995911 Arabidopsis thaliana
AT5G09670 1.0kb upstream 1.0kb upstream 4021 true Chr5: 2995912-2999932 Arabidopsis thaliana
AT5G09670 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2998933-2999932 Arabidopsis thaliana
AT5G09670 1.0kb downstream 1.0kb downstream 4021 true Chr5: 2994912-2998932 Arabidopsis thaliana
AT5G09670 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2994912-2995911 Arabidopsis thaliana
AT5G09670 2.0kb upstream 2.0kb upstream 5021 true Chr5: 2995912-3000932 Arabidopsis thaliana
AT5G09670 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2998933-3000932 Arabidopsis thaliana
AT5G09670 2.0kb downstream 2.0kb downstream 5021 true Chr5: 2993912-2998932 Arabidopsis thaliana
AT5G09670 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2993912-2995911 Arabidopsis thaliana
AT5G09670 5.0kb upstream 5.0kb upstream 8021 true Chr5: 2995912-3003932 Arabidopsis thaliana
AT5G09670 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2998933-3003932 Arabidopsis thaliana
AT5G09670 5.0kb downstream 5.0kb downstream 8021 true Chr5: 2990912-2998932 Arabidopsis thaliana
AT5G09670 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2990912-2995911 Arabidopsis thaliana
AT5G09670 10.0kb upstream 10.0kb upstream 13021 true Chr5: 2995912-3008932 Arabidopsis thaliana
AT5G09670 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2998933-3008932 Arabidopsis thaliana
AT5G09670 10.0kb downstream 10.0kb downstream 13021 true Chr5: 2985912-2998932 Arabidopsis thaliana
AT5G09670 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2985912-2995911 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041326 5273 Angiosperm View MSA
122375533 5261 Brassicaceae View MSA
123800985 5264 Brassicales-Malvales View MSA
124298334 5266 SBM View MSA
124149997 5268 Malvidae View MSA
123875698 5270 Rosid View MSA
123459480 5271 Pentapetalae View MSA
122494870 5272 Eudicot View MSA
121351095 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.582       High
cufflinks 0.04     Low  
cufflinks 0.349        
cufflinks 0.026     Low Low
cufflinks 0.289        
cufflinks 0.045     Low  

0 Strain