Gene : AT5G09560 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10288//PTHR10288:SF174 - KH DOMAIN CONTAINING RNA BINDING PROTEIN // RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Genomic Order:  868
Name:  ? AT5G09560 Secondary Identifier:  ? PAC:19669167
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09560 0.5kb upstream 0.5kb upstream 2986 true Chr5: 2966670-2969655 Arabidopsis thaliana
AT5G09560 0.5kb upstream 0.5kb upstream 500 false Chr5: 2966670-2967169 Arabidopsis thaliana
AT5G09560 0.5kb downstream 0.5kb downstream 2986 true Chr5: 2967170-2970155 Arabidopsis thaliana
AT5G09560 0.5kb downstream 0.5kb downstream 500 false Chr5: 2969656-2970155 Arabidopsis thaliana
AT5G09560 1.0kb upstream 1.0kb upstream 3486 true Chr5: 2966170-2969655 Arabidopsis thaliana
AT5G09560 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2966170-2967169 Arabidopsis thaliana
AT5G09560 1.0kb downstream 1.0kb downstream 3486 true Chr5: 2967170-2970655 Arabidopsis thaliana
AT5G09560 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2969656-2970655 Arabidopsis thaliana
AT5G09560 2.0kb upstream 2.0kb upstream 4486 true Chr5: 2965170-2969655 Arabidopsis thaliana
AT5G09560 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2965170-2967169 Arabidopsis thaliana
AT5G09560 2.0kb downstream 2.0kb downstream 4486 true Chr5: 2967170-2971655 Arabidopsis thaliana
AT5G09560 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2969656-2971655 Arabidopsis thaliana
AT5G09560 5.0kb upstream 5.0kb upstream 7486 true Chr5: 2962170-2969655 Arabidopsis thaliana
AT5G09560 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2962170-2967169 Arabidopsis thaliana
AT5G09560 5.0kb downstream 5.0kb downstream 7486 true Chr5: 2967170-2974655 Arabidopsis thaliana
AT5G09560 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2969656-2974655 Arabidopsis thaliana
AT5G09560 10.0kb upstream 10.0kb upstream 12486 true Chr5: 2957170-2969655 Arabidopsis thaliana
AT5G09560 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2957170-2967169 Arabidopsis thaliana
AT5G09560 10.0kb downstream 10.0kb downstream 12486 true Chr5: 2967170-2979655 Arabidopsis thaliana
AT5G09560 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2969656-2979655 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343391 5261 Brassicaceae View MSA
123783608 5264 Brassicales-Malvales View MSA
124281830 5266 SBM View MSA
124136516 5268 Malvidae View MSA
124070518 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain