Gene : AT5G09620 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31066:SF2 - GB|AAD14519.1 Genomic Order:  874
Name:  ? AT5G09620 Secondary Identifier:  ? PAC:19667960
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09620 0.5kb upstream 0.5kb upstream 2487 true Chr5: 2983449-2985935 Arabidopsis thaliana
AT5G09620 0.5kb upstream 0.5kb upstream 500 false Chr5: 2985436-2985935 Arabidopsis thaliana
AT5G09620 0.5kb downstream 0.5kb downstream 2487 true Chr5: 2982949-2985435 Arabidopsis thaliana
AT5G09620 0.5kb downstream 0.5kb downstream 500 false Chr5: 2982949-2983448 Arabidopsis thaliana
AT5G09620 1.0kb upstream 1.0kb upstream 2987 true Chr5: 2983449-2986435 Arabidopsis thaliana
AT5G09620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2985436-2986435 Arabidopsis thaliana
AT5G09620 1.0kb downstream 1.0kb downstream 2987 true Chr5: 2982449-2985435 Arabidopsis thaliana
AT5G09620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2982449-2983448 Arabidopsis thaliana
AT5G09620 2.0kb upstream 2.0kb upstream 3987 true Chr5: 2983449-2987435 Arabidopsis thaliana
AT5G09620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2985436-2987435 Arabidopsis thaliana
AT5G09620 2.0kb downstream 2.0kb downstream 3987 true Chr5: 2981449-2985435 Arabidopsis thaliana
AT5G09620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2981449-2983448 Arabidopsis thaliana
AT5G09620 5.0kb upstream 5.0kb upstream 6987 true Chr5: 2983449-2990435 Arabidopsis thaliana
AT5G09620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2985436-2990435 Arabidopsis thaliana
AT5G09620 5.0kb downstream 5.0kb downstream 6987 true Chr5: 2978449-2985435 Arabidopsis thaliana
AT5G09620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2978449-2983448 Arabidopsis thaliana
AT5G09620 10.0kb upstream 10.0kb upstream 11987 true Chr5: 2983449-2995435 Arabidopsis thaliana
AT5G09620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2985436-2995435 Arabidopsis thaliana
AT5G09620 10.0kb downstream 10.0kb downstream 11987 true Chr5: 2973449-2985435 Arabidopsis thaliana
AT5G09620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2973449-2983448 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366086 5261 Brassicaceae View MSA
123799107 5264 Brassicales-Malvales View MSA
124296659 5266 SBM View MSA
124248246 5268 Malvidae View MSA
124072365 5270 Rosid View MSA
123740761 5271 Pentapetalae View MSA
122794728 5272 Eudicot View MSA
122047494 5273 Angiosperm View MSA
121310747 5274 Embryophyte View MSA
123348158 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.392     High  
cufflinks 35.585     High  
cufflinks 31.665     High Low
cufflinks 37.89     High  
cufflinks 39.995     High  
cufflinks 40.921     High High

0 Strain