Gene : AT5G09300 A. thaliana TAIR10
Defline:  (1 of 1) 1.2.1.25//1.2.4.4 - 2-oxoisovalerate dehydrogenase (acylating) // 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  838
Name:  ? AT5G09300 Secondary Identifier:  ? PAC:19673233
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5046 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09300 0.5kb upstream 0.5kb upstream 3185 true Chr5: 2884179-2887363 Arabidopsis thaliana
AT5G09300 0.5kb upstream 0.5kb upstream 500 false Chr5: 2886864-2887363 Arabidopsis thaliana
AT5G09300 0.5kb downstream 0.5kb downstream 3185 true Chr5: 2883679-2886863 Arabidopsis thaliana
AT5G09300 0.5kb downstream 0.5kb downstream 500 false Chr5: 2883679-2884178 Arabidopsis thaliana
AT5G09300 1.0kb upstream 1.0kb upstream 3685 true Chr5: 2884179-2887863 Arabidopsis thaliana
AT5G09300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 2886864-2887863 Arabidopsis thaliana
AT5G09300 1.0kb downstream 1.0kb downstream 3685 true Chr5: 2883179-2886863 Arabidopsis thaliana
AT5G09300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 2883179-2884178 Arabidopsis thaliana
AT5G09300 2.0kb upstream 2.0kb upstream 4685 true Chr5: 2884179-2888863 Arabidopsis thaliana
AT5G09300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 2886864-2888863 Arabidopsis thaliana
AT5G09300 2.0kb downstream 2.0kb downstream 4685 true Chr5: 2882179-2886863 Arabidopsis thaliana
AT5G09300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 2882179-2884178 Arabidopsis thaliana
AT5G09300 5.0kb upstream 5.0kb upstream 7685 true Chr5: 2884179-2891863 Arabidopsis thaliana
AT5G09300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 2886864-2891863 Arabidopsis thaliana
AT5G09300 5.0kb downstream 5.0kb downstream 7685 true Chr5: 2879179-2886863 Arabidopsis thaliana
AT5G09300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 2879179-2884178 Arabidopsis thaliana
AT5G09300 10.0kb upstream 10.0kb upstream 12685 true Chr5: 2884179-2896863 Arabidopsis thaliana
AT5G09300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 2886864-2896863 Arabidopsis thaliana
AT5G09300 10.0kb downstream 10.0kb downstream 12685 true Chr5: 2874179-2886863 Arabidopsis thaliana
AT5G09300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 2874179-2884178 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374463 5261 Brassicaceae View MSA
123829479 5264 Brassicales-Malvales View MSA
124346175 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.627        
cufflinks 1.928        
cufflinks 1.346        
cufflinks 3.549       High
cufflinks 1.474        
cufflinks 2.014        

0 Strain