Gene : AT5G12220 A. thaliana TAIR10
Defline:  (1 of 1) K16912 - ribosomal biogenesis protein LAS1 (LAS1) Genomic Order:  1148
Name:  ? AT5G12220 Secondary Identifier:  ? PAC:19665332
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12220 0.5kb upstream 0.5kb upstream 3507 true Chr5: 3949638-3953144 Arabidopsis thaliana
AT5G12220 0.5kb upstream 0.5kb upstream 500 false Chr5: 3949638-3950137 Arabidopsis thaliana
AT5G12220 0.5kb downstream 0.5kb downstream 3507 true Chr5: 3950138-3953644 Arabidopsis thaliana
AT5G12220 0.5kb downstream 0.5kb downstream 500 false Chr5: 3953145-3953644 Arabidopsis thaliana
AT5G12220 1.0kb upstream 1.0kb upstream 4007 true Chr5: 3949138-3953144 Arabidopsis thaliana
AT5G12220 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3949138-3950137 Arabidopsis thaliana
AT5G12220 1.0kb downstream 1.0kb downstream 4007 true Chr5: 3950138-3954144 Arabidopsis thaliana
AT5G12220 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3953145-3954144 Arabidopsis thaliana
AT5G12220 2.0kb upstream 2.0kb upstream 5007 true Chr5: 3948138-3953144 Arabidopsis thaliana
AT5G12220 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3948138-3950137 Arabidopsis thaliana
AT5G12220 2.0kb downstream 2.0kb downstream 5007 true Chr5: 3950138-3955144 Arabidopsis thaliana
AT5G12220 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3953145-3955144 Arabidopsis thaliana
AT5G12220 5.0kb upstream 5.0kb upstream 8007 true Chr5: 3945138-3953144 Arabidopsis thaliana
AT5G12220 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3945138-3950137 Arabidopsis thaliana
AT5G12220 5.0kb downstream 5.0kb downstream 8007 true Chr5: 3950138-3958144 Arabidopsis thaliana
AT5G12220 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3953145-3958144 Arabidopsis thaliana
AT5G12220 10.0kb upstream 10.0kb upstream 13007 true Chr5: 3940138-3953144 Arabidopsis thaliana
AT5G12220 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3940138-3950137 Arabidopsis thaliana
AT5G12220 10.0kb downstream 10.0kb downstream 13007 true Chr5: 3950138-3963144 Arabidopsis thaliana
AT5G12220 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3953145-3963144 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361294 5261 Brassicaceae View MSA
123831586 5264 Brassicales-Malvales View MSA
124339712 5266 SBM View MSA
124238799 5268 Malvidae View MSA
124060949 5270 Rosid View MSA
123737052 5271 Pentapetalae View MSA
122791609 5272 Eudicot View MSA
122045405 5273 Angiosperm View MSA
121348561 5274 Embryophyte View MSA
123425932 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.147        
cufflinks 2.386        
cufflinks 1.899        
cufflinks 2.422        
cufflinks 1.601       Low
cufflinks 2.637       High

0 Strain