Gene : MED19A A. thaliana TAIR10
Primary Identifier:  ? AT5G12230 Defline:  (1 of 2) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN
Genomic Order:  1149 Name:  ? AT5G12230
Secondary Identifier:  ? PAC:19673237
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12230 0.5kb upstream 0.5kb upstream 3538 true Chr5: 3953148-3956685 Arabidopsis thaliana
AT5G12230 0.5kb upstream 0.5kb upstream 500 false Chr5: 3956186-3956685 Arabidopsis thaliana
AT5G12230 0.5kb downstream 0.5kb downstream 3538 true Chr5: 3952648-3956185 Arabidopsis thaliana
AT5G12230 0.5kb downstream 0.5kb downstream 500 false Chr5: 3952648-3953147 Arabidopsis thaliana
AT5G12230 1.0kb upstream 1.0kb upstream 4038 true Chr5: 3953148-3957185 Arabidopsis thaliana
AT5G12230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3956186-3957185 Arabidopsis thaliana
AT5G12230 1.0kb downstream 1.0kb downstream 4038 true Chr5: 3952148-3956185 Arabidopsis thaliana
AT5G12230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3952148-3953147 Arabidopsis thaliana
AT5G12230 2.0kb upstream 2.0kb upstream 5038 true Chr5: 3953148-3958185 Arabidopsis thaliana
AT5G12230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3956186-3958185 Arabidopsis thaliana
AT5G12230 2.0kb downstream 2.0kb downstream 5038 true Chr5: 3951148-3956185 Arabidopsis thaliana
AT5G12230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3951148-3953147 Arabidopsis thaliana
AT5G12230 5.0kb upstream 5.0kb upstream 8038 true Chr5: 3953148-3961185 Arabidopsis thaliana
AT5G12230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3956186-3961185 Arabidopsis thaliana
AT5G12230 5.0kb downstream 5.0kb downstream 8038 true Chr5: 3948148-3956185 Arabidopsis thaliana
AT5G12230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3948148-3953147 Arabidopsis thaliana
AT5G12230 10.0kb upstream 10.0kb upstream 13038 true Chr5: 3953148-3966185 Arabidopsis thaliana
AT5G12230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3956186-3966185 Arabidopsis thaliana
AT5G12230 10.0kb downstream 10.0kb downstream 13038 true Chr5: 3943148-3956185 Arabidopsis thaliana
AT5G12230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3943148-3953147 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368643 5261 Brassicaceae View MSA
123833334 5264 Brassicales-Malvales View MSA
124321862 5266 SBM View MSA
124243428 5268 Malvidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.688        
cufflinks 25.376       High
cufflinks 7.715        
cufflinks 17.26        
cufflinks 6.86       Low
cufflinks 18.641        

0 Strain