Gene : AT5G12110 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11595//PTHR11595:SF24 - ELONGATION FACTOR 1-BETA // ELONGATION FACTOR 1-BETA 1-RELATED Genomic Order:  1138
Name:  ? AT5G12110 Secondary Identifier:  ? PAC:19671583
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12110 0.5kb upstream 0.5kb upstream 2001 true Chr5: 3913968-3915968 Arabidopsis thaliana
AT5G12110 0.5kb upstream 0.5kb upstream 500 false Chr5: 3913968-3914467 Arabidopsis thaliana
AT5G12110 0.5kb downstream 0.5kb downstream 2001 true Chr5: 3914468-3916468 Arabidopsis thaliana
AT5G12110 0.5kb downstream 0.5kb downstream 500 false Chr5: 3915969-3916468 Arabidopsis thaliana
AT5G12110 1.0kb upstream 1.0kb upstream 2501 true Chr5: 3913468-3915968 Arabidopsis thaliana
AT5G12110 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3913468-3914467 Arabidopsis thaliana
AT5G12110 1.0kb downstream 1.0kb downstream 2501 true Chr5: 3914468-3916968 Arabidopsis thaliana
AT5G12110 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3915969-3916968 Arabidopsis thaliana
AT5G12110 2.0kb upstream 2.0kb upstream 3501 true Chr5: 3912468-3915968 Arabidopsis thaliana
AT5G12110 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3912468-3914467 Arabidopsis thaliana
AT5G12110 2.0kb downstream 2.0kb downstream 3501 true Chr5: 3914468-3917968 Arabidopsis thaliana
AT5G12110 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3915969-3917968 Arabidopsis thaliana
AT5G12110 5.0kb upstream 5.0kb upstream 6501 true Chr5: 3909468-3915968 Arabidopsis thaliana
AT5G12110 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3909468-3914467 Arabidopsis thaliana
AT5G12110 5.0kb downstream 5.0kb downstream 6501 true Chr5: 3914468-3920968 Arabidopsis thaliana
AT5G12110 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3915969-3920968 Arabidopsis thaliana
AT5G12110 10.0kb upstream 10.0kb upstream 11501 true Chr5: 3904468-3915968 Arabidopsis thaliana
AT5G12110 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3904468-3914467 Arabidopsis thaliana
AT5G12110 10.0kb downstream 10.0kb downstream 11501 true Chr5: 3914468-3925968 Arabidopsis thaliana
AT5G12110 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3915969-3925968 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372938 5261 Brassicaceae View MSA
123839395 5264 Brassicales-Malvales View MSA
124337173 5266 SBM View MSA
124239441 5268 Malvidae View MSA
124069171 5270 Rosid View MSA
123737749 5271 Pentapetalae View MSA
122793737 5272 Eudicot View MSA
122043548 5273 Angiosperm View MSA
121344333 5274 Embryophyte View MSA
123425760 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.241        
cufflinks 4.086        
cufflinks 3.345        
cufflinks 5.885        
cufflinks 2.287       Low
cufflinks 6.094       High

0 Strain