Gene : AT5G12120 A. thaliana TAIR10
Defline:  Ubiquitin-associated/translation elongation factor EF1B protein Genomic Order:  1139
Name:  ? AT5G12120 Secondary Identifier:  ? PAC:19667218
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12120 0.5kb upstream 0.5kb upstream 3112 true Chr5: 3916048-3919159 Arabidopsis thaliana
AT5G12120 0.5kb upstream 0.5kb upstream 500 false Chr5: 3918660-3919159 Arabidopsis thaliana
AT5G12120 0.5kb downstream 0.5kb downstream 3112 true Chr5: 3915548-3918659 Arabidopsis thaliana
AT5G12120 0.5kb downstream 0.5kb downstream 500 false Chr5: 3915548-3916047 Arabidopsis thaliana
AT5G12120 1.0kb upstream 1.0kb upstream 3612 true Chr5: 3916048-3919659 Arabidopsis thaliana
AT5G12120 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3918660-3919659 Arabidopsis thaliana
AT5G12120 1.0kb downstream 1.0kb downstream 3612 true Chr5: 3915048-3918659 Arabidopsis thaliana
AT5G12120 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3915048-3916047 Arabidopsis thaliana
AT5G12120 2.0kb upstream 2.0kb upstream 4612 true Chr5: 3916048-3920659 Arabidopsis thaliana
AT5G12120 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3918660-3920659 Arabidopsis thaliana
AT5G12120 2.0kb downstream 2.0kb downstream 4612 true Chr5: 3914048-3918659 Arabidopsis thaliana
AT5G12120 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3914048-3916047 Arabidopsis thaliana
AT5G12120 5.0kb upstream 5.0kb upstream 7612 true Chr5: 3916048-3923659 Arabidopsis thaliana
AT5G12120 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3918660-3923659 Arabidopsis thaliana
AT5G12120 5.0kb downstream 5.0kb downstream 7612 true Chr5: 3911048-3918659 Arabidopsis thaliana
AT5G12120 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3911048-3916047 Arabidopsis thaliana
AT5G12120 10.0kb upstream 10.0kb upstream 12612 true Chr5: 3916048-3928659 Arabidopsis thaliana
AT5G12120 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3918660-3928659 Arabidopsis thaliana
AT5G12120 10.0kb downstream 10.0kb downstream 12612 true Chr5: 3906048-3918659 Arabidopsis thaliana
AT5G12120 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3906048-3916047 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375807 5261 Brassicaceae View MSA
123840362 5264 Brassicales-Malvales View MSA
124340487 5266 SBM View MSA
124245797 5268 Malvidae View MSA
124063502 5270 Rosid View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.439       High
cufflinks 21.298       Low
cufflinks 24.943        
cufflinks 23.265        
cufflinks 25.186        
cufflinks 22.58        

0 Strain