Gene : cwINV6 A. thaliana TAIR10
Primary Identifier:  ? AT5G11920 Defline:  (1 of 1) 3.2.1.7 - Inulinase / Inulase
Genomic Order:  1118 Name:  ? AT5G11920
Secondary Identifier:  ? PAC:19670701
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-862 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11920 0.5kb upstream 0.5kb upstream 3481 true Chr5: 3838891-3842371 Arabidopsis thaliana
AT5G11920 0.5kb upstream 0.5kb upstream 500 false Chr5: 3838891-3839390 Arabidopsis thaliana
AT5G11920 0.5kb downstream 0.5kb downstream 3481 true Chr5: 3839391-3842871 Arabidopsis thaliana
AT5G11920 0.5kb downstream 0.5kb downstream 500 false Chr5: 3842372-3842871 Arabidopsis thaliana
AT5G11920 1.0kb upstream 1.0kb upstream 3981 true Chr5: 3838391-3842371 Arabidopsis thaliana
AT5G11920 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3838391-3839390 Arabidopsis thaliana
AT5G11920 1.0kb downstream 1.0kb downstream 3981 true Chr5: 3839391-3843371 Arabidopsis thaliana
AT5G11920 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3842372-3843371 Arabidopsis thaliana
AT5G11920 2.0kb upstream 2.0kb upstream 4981 true Chr5: 3837391-3842371 Arabidopsis thaliana
AT5G11920 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3837391-3839390 Arabidopsis thaliana
AT5G11920 2.0kb downstream 2.0kb downstream 4981 true Chr5: 3839391-3844371 Arabidopsis thaliana
AT5G11920 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3842372-3844371 Arabidopsis thaliana
AT5G11920 5.0kb upstream 5.0kb upstream 7981 true Chr5: 3834391-3842371 Arabidopsis thaliana
AT5G11920 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3834391-3839390 Arabidopsis thaliana
AT5G11920 5.0kb downstream 5.0kb downstream 7981 true Chr5: 3839391-3847371 Arabidopsis thaliana
AT5G11920 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3842372-3847371 Arabidopsis thaliana
AT5G11920 10.0kb upstream 10.0kb upstream 12981 true Chr5: 3829391-3842371 Arabidopsis thaliana
AT5G11920 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3829391-3839390 Arabidopsis thaliana
AT5G11920 10.0kb downstream 10.0kb downstream 12981 true Chr5: 3839391-3852371 Arabidopsis thaliana
AT5G11920 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3842372-3852371 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364347 5261 Brassicaceae View MSA
123837671 5264 Brassicales-Malvales View MSA
124348139 5266 SBM View MSA
124249602 5268 Malvidae View MSA
124070033 5270 Rosid View MSA
123752983 5271 Pentapetalae View MSA
122793631 5272 Eudicot View MSA
122047232 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.904        
cufflinks 3.387        
cufflinks 0.039     Low Low
cufflinks 6.868        
cufflinks 0.199     Low  
cufflinks 7.216        

0 Strain