Gene : AT5G11720 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22762//PTHR22762:SF82 - ALPHA-GLUCOSIDASE // PROTEIN AAGR-1 Genomic Order:  1098
Name:  ? AT5G11720 Secondary Identifier:  ? PAC:19671812
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11720 0.5kb upstream 0.5kb upstream 3833 true Chr5: 3776314-3780146 Arabidopsis thaliana
AT5G11720 0.5kb upstream 0.5kb upstream 500 false Chr5: 3776314-3776813 Arabidopsis thaliana
AT5G11720 0.5kb downstream 0.5kb downstream 3833 true Chr5: 3776814-3780646 Arabidopsis thaliana
AT5G11720 0.5kb downstream 0.5kb downstream 500 false Chr5: 3780147-3780646 Arabidopsis thaliana
AT5G11720 1.0kb upstream 1.0kb upstream 4333 true Chr5: 3775814-3780146 Arabidopsis thaliana
AT5G11720 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3775814-3776813 Arabidopsis thaliana
AT5G11720 1.0kb downstream 1.0kb downstream 4333 true Chr5: 3776814-3781146 Arabidopsis thaliana
AT5G11720 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3780147-3781146 Arabidopsis thaliana
AT5G11720 2.0kb upstream 2.0kb upstream 5333 true Chr5: 3774814-3780146 Arabidopsis thaliana
AT5G11720 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3774814-3776813 Arabidopsis thaliana
AT5G11720 2.0kb downstream 2.0kb downstream 5333 true Chr5: 3776814-3782146 Arabidopsis thaliana
AT5G11720 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3780147-3782146 Arabidopsis thaliana
AT5G11720 5.0kb upstream 5.0kb upstream 8333 true Chr5: 3771814-3780146 Arabidopsis thaliana
AT5G11720 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3771814-3776813 Arabidopsis thaliana
AT5G11720 5.0kb downstream 5.0kb downstream 8333 true Chr5: 3776814-3785146 Arabidopsis thaliana
AT5G11720 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3780147-3785146 Arabidopsis thaliana
AT5G11720 10.0kb upstream 10.0kb upstream 13333 true Chr5: 3766814-3780146 Arabidopsis thaliana
AT5G11720 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3766814-3776813 Arabidopsis thaliana
AT5G11720 10.0kb downstream 10.0kb downstream 13333 true Chr5: 3776814-3790146 Arabidopsis thaliana
AT5G11720 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3780147-3790146 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364576 5261 Brassicaceae View MSA
123829677 5264 Brassicales-Malvales View MSA
124337707 5266 SBM View MSA
124243150 5268 Malvidae View MSA
124063402 5270 Rosid View MSA
123748401 5271 Pentapetalae View MSA
122786472 5272 Eudicot View MSA
122047200 5273 Angiosperm View MSA
121351039 5274 Embryophyte View MSA
123427739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.414       High
cufflinks 15.447        
cufflinks 21.275        
cufflinks 17.26        
cufflinks 19.746        
cufflinks 13.784       Low

0 Strain