Gene : AT5G11710 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12276//PTHR12276:SF7 - EPSIN/ENT-RELATED // CLATHRIN INTERACTOR EPSIN 1 Genomic Order:  1097
Name:  ? AT5G11710 Secondary Identifier:  ? PAC:19668149
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11710 0.5kb upstream 0.5kb upstream 4345 true Chr5: 3772318-3776662 Arabidopsis thaliana
AT5G11710 0.5kb upstream 0.5kb upstream 500 false Chr5: 3772318-3772817 Arabidopsis thaliana
AT5G11710 0.5kb downstream 0.5kb downstream 4345 true Chr5: 3772818-3777162 Arabidopsis thaliana
AT5G11710 0.5kb downstream 0.5kb downstream 500 false Chr5: 3776663-3777162 Arabidopsis thaliana
AT5G11710 1.0kb upstream 1.0kb upstream 4845 true Chr5: 3771818-3776662 Arabidopsis thaliana
AT5G11710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3771818-3772817 Arabidopsis thaliana
AT5G11710 1.0kb downstream 1.0kb downstream 4845 true Chr5: 3772818-3777662 Arabidopsis thaliana
AT5G11710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3776663-3777662 Arabidopsis thaliana
AT5G11710 2.0kb upstream 2.0kb upstream 5845 true Chr5: 3770818-3776662 Arabidopsis thaliana
AT5G11710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3770818-3772817 Arabidopsis thaliana
AT5G11710 2.0kb downstream 2.0kb downstream 5845 true Chr5: 3772818-3778662 Arabidopsis thaliana
AT5G11710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3776663-3778662 Arabidopsis thaliana
AT5G11710 5.0kb upstream 5.0kb upstream 8845 true Chr5: 3767818-3776662 Arabidopsis thaliana
AT5G11710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3767818-3772817 Arabidopsis thaliana
AT5G11710 5.0kb downstream 5.0kb downstream 8845 true Chr5: 3772818-3781662 Arabidopsis thaliana
AT5G11710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3776663-3781662 Arabidopsis thaliana
AT5G11710 10.0kb upstream 10.0kb upstream 13845 true Chr5: 3762818-3776662 Arabidopsis thaliana
AT5G11710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3762818-3772817 Arabidopsis thaliana
AT5G11710 10.0kb downstream 10.0kb downstream 13845 true Chr5: 3772818-3786662 Arabidopsis thaliana
AT5G11710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3776663-3786662 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374458 5261 Brassicaceae View MSA
123830256 5264 Brassicales-Malvales View MSA
124343759 5266 SBM View MSA
124239073 5268 Malvidae View MSA
124066182 5270 Rosid View MSA
123744434 5271 Pentapetalae View MSA
122786482 5272 Eudicot View MSA
122049187 5273 Angiosperm View MSA
121349061 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.638        
cufflinks 28.409        
cufflinks 19.893       Low
cufflinks 30.622     High  
cufflinks 21.944        
cufflinks 32.553     High High

0 Strain