Gene : AT5G11650 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11614:SF96 - ALPHA/BETA FOLD HYDROLASE FAMILY PROTEIN Genomic Order:  1091
Name:  ? AT5G11650 Secondary Identifier:  ? PAC:19668664
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7420 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11650 0.5kb upstream 0.5kb upstream 2646 true Chr5: 3744480-3747125 Arabidopsis thaliana
AT5G11650 0.5kb upstream 0.5kb upstream 500 false Chr5: 3744480-3744979 Arabidopsis thaliana
AT5G11650 0.5kb downstream 0.5kb downstream 2646 true Chr5: 3744980-3747625 Arabidopsis thaliana
AT5G11650 0.5kb downstream 0.5kb downstream 500 false Chr5: 3747126-3747625 Arabidopsis thaliana
AT5G11650 1.0kb upstream 1.0kb upstream 3146 true Chr5: 3743980-3747125 Arabidopsis thaliana
AT5G11650 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3743980-3744979 Arabidopsis thaliana
AT5G11650 1.0kb downstream 1.0kb downstream 3146 true Chr5: 3744980-3748125 Arabidopsis thaliana
AT5G11650 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3747126-3748125 Arabidopsis thaliana
AT5G11650 2.0kb upstream 2.0kb upstream 4146 true Chr5: 3742980-3747125 Arabidopsis thaliana
AT5G11650 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3742980-3744979 Arabidopsis thaliana
AT5G11650 2.0kb downstream 2.0kb downstream 4146 true Chr5: 3744980-3749125 Arabidopsis thaliana
AT5G11650 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3747126-3749125 Arabidopsis thaliana
AT5G11650 5.0kb upstream 5.0kb upstream 7146 true Chr5: 3739980-3747125 Arabidopsis thaliana
AT5G11650 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3739980-3744979 Arabidopsis thaliana
AT5G11650 5.0kb downstream 5.0kb downstream 7146 true Chr5: 3744980-3752125 Arabidopsis thaliana
AT5G11650 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3747126-3752125 Arabidopsis thaliana
AT5G11650 10.0kb upstream 10.0kb upstream 12146 true Chr5: 3734980-3747125 Arabidopsis thaliana
AT5G11650 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3734980-3744979 Arabidopsis thaliana
AT5G11650 10.0kb downstream 10.0kb downstream 12146 true Chr5: 3744980-3757125 Arabidopsis thaliana
AT5G11650 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3747126-3757125 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367534 5261 Brassicaceae View MSA
123832405 5264 Brassicales-Malvales View MSA
124351220 5266 SBM View MSA
124247266 5268 Malvidae View MSA
124065565 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.92        
cufflinks 43.434     High High
cufflinks 8.002        
cufflinks 32.667     High  
cufflinks 8.154        
cufflinks 40.778     High  

0 Strain