Gene : AT5G11630 A. thaliana TAIR10
Genomic Order:  1089 Name:  ? AT5G11630
Secondary Identifier:  ? PAC:19665430
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11630 0.5kb upstream 0.5kb upstream 2180 true Chr5: 3739960-3742139 Arabidopsis thaliana
AT5G11630 0.5kb upstream 0.5kb upstream 500 false Chr5: 3739960-3740459 Arabidopsis thaliana
AT5G11630 0.5kb downstream 0.5kb downstream 2180 true Chr5: 3740460-3742639 Arabidopsis thaliana
AT5G11630 0.5kb downstream 0.5kb downstream 500 false Chr5: 3742140-3742639 Arabidopsis thaliana
AT5G11630 1.0kb upstream 1.0kb upstream 2680 true Chr5: 3739460-3742139 Arabidopsis thaliana
AT5G11630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3739460-3740459 Arabidopsis thaliana
AT5G11630 1.0kb downstream 1.0kb downstream 2680 true Chr5: 3740460-3743139 Arabidopsis thaliana
AT5G11630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3742140-3743139 Arabidopsis thaliana
AT5G11630 2.0kb upstream 2.0kb upstream 3680 true Chr5: 3738460-3742139 Arabidopsis thaliana
AT5G11630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3738460-3740459 Arabidopsis thaliana
AT5G11630 2.0kb downstream 2.0kb downstream 3680 true Chr5: 3740460-3744139 Arabidopsis thaliana
AT5G11630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3742140-3744139 Arabidopsis thaliana
AT5G11630 5.0kb upstream 5.0kb upstream 6680 true Chr5: 3735460-3742139 Arabidopsis thaliana
AT5G11630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3735460-3740459 Arabidopsis thaliana
AT5G11630 5.0kb downstream 5.0kb downstream 6680 true Chr5: 3740460-3747139 Arabidopsis thaliana
AT5G11630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3742140-3747139 Arabidopsis thaliana
AT5G11630 10.0kb upstream 10.0kb upstream 11680 true Chr5: 3730460-3742139 Arabidopsis thaliana
AT5G11630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3730460-3740459 Arabidopsis thaliana
AT5G11630 10.0kb downstream 10.0kb downstream 11680 true Chr5: 3740460-3752139 Arabidopsis thaliana
AT5G11630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3742140-3752139 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378237 5261 Brassicaceae View MSA
123841257 5264 Brassicales-Malvales View MSA
124345796 5266 SBM View MSA
124252223 5268 Malvidae View MSA
124073761 5270 Rosid View MSA
123742798 5271 Pentapetalae View MSA
122793453 5272 Eudicot View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.065        
cufflinks 3.972        
cufflinks 2.016       Low
cufflinks 4.013        
cufflinks 1.842       Low
cufflinks 4.15        

0 Strain