Gene : AT5G11680 A. thaliana TAIR10
Defline:  (1 of 1) KOG3294 - WW domain binding protein WBP-2, contains GRAM domain Genomic Order:  1094
Name:  ? AT5G11680 Secondary Identifier:  ? PAC:19670510
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11680 0.5kb upstream 0.5kb upstream 2494 true Chr5: 3758358-3760851 Arabidopsis thaliana
AT5G11680 0.5kb upstream 0.5kb upstream 500 false Chr5: 3758358-3758857 Arabidopsis thaliana
AT5G11680 0.5kb downstream 0.5kb downstream 2494 true Chr5: 3758858-3761351 Arabidopsis thaliana
AT5G11680 0.5kb downstream 0.5kb downstream 500 false Chr5: 3760852-3761351 Arabidopsis thaliana
AT5G11680 1.0kb upstream 1.0kb upstream 2994 true Chr5: 3757858-3760851 Arabidopsis thaliana
AT5G11680 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3757858-3758857 Arabidopsis thaliana
AT5G11680 1.0kb downstream 1.0kb downstream 2994 true Chr5: 3758858-3761851 Arabidopsis thaliana
AT5G11680 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3760852-3761851 Arabidopsis thaliana
AT5G11680 2.0kb upstream 2.0kb upstream 3994 true Chr5: 3756858-3760851 Arabidopsis thaliana
AT5G11680 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3756858-3758857 Arabidopsis thaliana
AT5G11680 2.0kb downstream 2.0kb downstream 3994 true Chr5: 3758858-3762851 Arabidopsis thaliana
AT5G11680 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3760852-3762851 Arabidopsis thaliana
AT5G11680 5.0kb upstream 5.0kb upstream 6994 true Chr5: 3753858-3760851 Arabidopsis thaliana
AT5G11680 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3753858-3758857 Arabidopsis thaliana
AT5G11680 5.0kb downstream 5.0kb downstream 6994 true Chr5: 3758858-3765851 Arabidopsis thaliana
AT5G11680 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3760852-3765851 Arabidopsis thaliana
AT5G11680 10.0kb upstream 10.0kb upstream 11994 true Chr5: 3748858-3760851 Arabidopsis thaliana
AT5G11680 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3748858-3758857 Arabidopsis thaliana
AT5G11680 10.0kb downstream 10.0kb downstream 11994 true Chr5: 3758858-3770851 Arabidopsis thaliana
AT5G11680 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3760852-3770851 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372437 5261 Brassicaceae View MSA
123835892 5264 Brassicales-Malvales View MSA
124340589 5266 SBM View MSA
124241730 5268 Malvidae View MSA
124065343 5270 Rosid View MSA
123736865 5271 Pentapetalae View MSA
122788615 5272 Eudicot View MSA
122045480 5273 Angiosperm View MSA
121350995 5274 Embryophyte View MSA
123424898 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.407       High
cufflinks 17.611        
cufflinks 16.286       Low
cufflinks 17.924        
cufflinks 16.709        
cufflinks 18.957        

0 Strain