Gene : AT5G11500 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13049 - DUF814-RELATED Genomic Order:  1076
Name:  ? AT5G11500 Secondary Identifier:  ? PAC:19672250
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11500 0.5kb upstream 0.5kb upstream 3305 true Chr5: 3676048-3679352 Arabidopsis thaliana
AT5G11500 0.5kb upstream 0.5kb upstream 500 false Chr5: 3676048-3676547 Arabidopsis thaliana
AT5G11500 0.5kb downstream 0.5kb downstream 3305 true Chr5: 3676548-3679852 Arabidopsis thaliana
AT5G11500 0.5kb downstream 0.5kb downstream 500 false Chr5: 3679353-3679852 Arabidopsis thaliana
AT5G11500 1.0kb upstream 1.0kb upstream 3805 true Chr5: 3675548-3679352 Arabidopsis thaliana
AT5G11500 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3675548-3676547 Arabidopsis thaliana
AT5G11500 1.0kb downstream 1.0kb downstream 3805 true Chr5: 3676548-3680352 Arabidopsis thaliana
AT5G11500 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3679353-3680352 Arabidopsis thaliana
AT5G11500 2.0kb upstream 2.0kb upstream 4805 true Chr5: 3674548-3679352 Arabidopsis thaliana
AT5G11500 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3674548-3676547 Arabidopsis thaliana
AT5G11500 2.0kb downstream 2.0kb downstream 4805 true Chr5: 3676548-3681352 Arabidopsis thaliana
AT5G11500 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3679353-3681352 Arabidopsis thaliana
AT5G11500 5.0kb upstream 5.0kb upstream 7805 true Chr5: 3671548-3679352 Arabidopsis thaliana
AT5G11500 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3671548-3676547 Arabidopsis thaliana
AT5G11500 5.0kb downstream 5.0kb downstream 7805 true Chr5: 3676548-3684352 Arabidopsis thaliana
AT5G11500 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3679353-3684352 Arabidopsis thaliana
AT5G11500 10.0kb upstream 10.0kb upstream 12805 true Chr5: 3666548-3679352 Arabidopsis thaliana
AT5G11500 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3666548-3676547 Arabidopsis thaliana
AT5G11500 10.0kb downstream 10.0kb downstream 12805 true Chr5: 3676548-3689352 Arabidopsis thaliana
AT5G11500 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3679353-3689352 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373068 5261 Brassicaceae View MSA
123835279 5264 Brassicales-Malvales View MSA
124340501 5266 SBM View MSA
124242794 5268 Malvidae View MSA
124067087 5270 Rosid View MSA
123739069 5271 Pentapetalae View MSA
122794656 5272 Eudicot View MSA
122045362 5273 Angiosperm View MSA
121346079 5274 Embryophyte View MSA
123426375 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.846        
cufflinks 32.307     High High
cufflinks 22.644       Low
cufflinks 32.339     High High
cufflinks 26.452     High  
cufflinks 26.693        

0 Strain