Gene : AT5G11490 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11134//PTHR11134:SF4 - ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT // AP-4 COMPLEX SUBUNIT BETA-1 Genomic Order:  1075
Name:  ? AT5G11490 Secondary Identifier:  ? PAC:19671970
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11490 0.5kb upstream 0.5kb upstream 5165 true Chr5: 3671288-3676452 Arabidopsis thaliana
AT5G11490 0.5kb upstream 0.5kb upstream 500 false Chr5: 3671288-3671787 Arabidopsis thaliana
AT5G11490 0.5kb downstream 0.5kb downstream 5165 true Chr5: 3671788-3676952 Arabidopsis thaliana
AT5G11490 0.5kb downstream 0.5kb downstream 500 false Chr5: 3676453-3676952 Arabidopsis thaliana
AT5G11490 1.0kb upstream 1.0kb upstream 5665 true Chr5: 3670788-3676452 Arabidopsis thaliana
AT5G11490 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3670788-3671787 Arabidopsis thaliana
AT5G11490 1.0kb downstream 1.0kb downstream 5665 true Chr5: 3671788-3677452 Arabidopsis thaliana
AT5G11490 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3676453-3677452 Arabidopsis thaliana
AT5G11490 2.0kb upstream 2.0kb upstream 6665 true Chr5: 3669788-3676452 Arabidopsis thaliana
AT5G11490 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3669788-3671787 Arabidopsis thaliana
AT5G11490 2.0kb downstream 2.0kb downstream 6665 true Chr5: 3671788-3678452 Arabidopsis thaliana
AT5G11490 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3676453-3678452 Arabidopsis thaliana
AT5G11490 5.0kb upstream 5.0kb upstream 9665 true Chr5: 3666788-3676452 Arabidopsis thaliana
AT5G11490 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3666788-3671787 Arabidopsis thaliana
AT5G11490 5.0kb downstream 5.0kb downstream 9665 true Chr5: 3671788-3681452 Arabidopsis thaliana
AT5G11490 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3676453-3681452 Arabidopsis thaliana
AT5G11490 10.0kb upstream 10.0kb upstream 14665 true Chr5: 3661788-3676452 Arabidopsis thaliana
AT5G11490 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3661788-3671787 Arabidopsis thaliana
AT5G11490 10.0kb downstream 10.0kb downstream 14665 true Chr5: 3671788-3686452 Arabidopsis thaliana
AT5G11490 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3676453-3686452 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040917 5273 Angiosperm View MSA
122360416 5261 Brassicaceae View MSA
123828698 5264 Brassicales-Malvales View MSA
124337993 5266 SBM View MSA
124238234 5268 Malvidae View MSA
124062984 5270 Rosid View MSA
123740433 5271 Pentapetalae View MSA
122790083 5272 Eudicot View MSA
121346542 5274 Embryophyte View MSA
123428647 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.897        
cufflinks 9.077        
cufflinks 6.63       Low
cufflinks 10.19       High
cufflinks 6.952        
cufflinks 9.709        

0 Strain