Gene : YUC4 A. thaliana TAIR10
Primary Identifier:  ? AT5G11320 Defline:  (1 of 4) PTHR23023//PTHR23023:SF37 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED
Genomic Order:  1055 Name:  ? AT5G11320
Secondary Identifier:  ? PAC:19665818
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWYDQC-4 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11320 0.5kb upstream 0.5kb upstream 2615 true Chr5: 3611247-3613861 Arabidopsis thaliana
AT5G11320 0.5kb upstream 0.5kb upstream 500 false Chr5: 3613362-3613861 Arabidopsis thaliana
AT5G11320 0.5kb downstream 0.5kb downstream 2615 true Chr5: 3610747-3613361 Arabidopsis thaliana
AT5G11320 0.5kb downstream 0.5kb downstream 500 false Chr5: 3610747-3611246 Arabidopsis thaliana
AT5G11320 1.0kb upstream 1.0kb upstream 3115 true Chr5: 3611247-3614361 Arabidopsis thaliana
AT5G11320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3613362-3614361 Arabidopsis thaliana
AT5G11320 1.0kb downstream 1.0kb downstream 3115 true Chr5: 3610247-3613361 Arabidopsis thaliana
AT5G11320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3610247-3611246 Arabidopsis thaliana
AT5G11320 2.0kb upstream 2.0kb upstream 4115 true Chr5: 3611247-3615361 Arabidopsis thaliana
AT5G11320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3613362-3615361 Arabidopsis thaliana
AT5G11320 2.0kb downstream 2.0kb downstream 4115 true Chr5: 3609247-3613361 Arabidopsis thaliana
AT5G11320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3609247-3611246 Arabidopsis thaliana
AT5G11320 5.0kb upstream 5.0kb upstream 7115 true Chr5: 3611247-3618361 Arabidopsis thaliana
AT5G11320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3613362-3618361 Arabidopsis thaliana
AT5G11320 5.0kb downstream 5.0kb downstream 7115 true Chr5: 3606247-3613361 Arabidopsis thaliana
AT5G11320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3606247-3611246 Arabidopsis thaliana
AT5G11320 10.0kb upstream 10.0kb upstream 12115 true Chr5: 3611247-3623361 Arabidopsis thaliana
AT5G11320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3613362-3623361 Arabidopsis thaliana
AT5G11320 10.0kb downstream 10.0kb downstream 12115 true Chr5: 3601247-3613361 Arabidopsis thaliana
AT5G11320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3601247-3611246 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372056 5261 Brassicaceae View MSA
123841606 5264 Brassicales-Malvales View MSA
124345129 5266 SBM View MSA
124252107 5268 Malvidae View MSA
124066807 5270 Rosid View MSA
123736759 5271 Pentapetalae View MSA
122792944 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.099     Low  
cufflinks 0.183     Low  
cufflinks 0.057     Low Low
cufflinks 0.349     Low High
cufflinks 0.078     Low  
cufflinks 0.237     Low  

0 Strain