Gene : WIT1 A. thaliana TAIR10
Primary Identifier:  ? AT5G11390 Defline:  (1 of 1) PTHR35705:SF1 - WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1
Genomic Order:  1062 Name:  ? AT5G11390
Secondary Identifier:  ? PAC:19671913
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11390 0.5kb upstream 0.5kb upstream 3404 true Chr5: 3633167-3636570 Arabidopsis thaliana
AT5G11390 0.5kb upstream 0.5kb upstream 500 false Chr5: 3633167-3633666 Arabidopsis thaliana
AT5G11390 0.5kb downstream 0.5kb downstream 3404 true Chr5: 3633667-3637070 Arabidopsis thaliana
AT5G11390 0.5kb downstream 0.5kb downstream 500 false Chr5: 3636571-3637070 Arabidopsis thaliana
AT5G11390 1.0kb upstream 1.0kb upstream 3904 true Chr5: 3632667-3636570 Arabidopsis thaliana
AT5G11390 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3632667-3633666 Arabidopsis thaliana
AT5G11390 1.0kb downstream 1.0kb downstream 3904 true Chr5: 3633667-3637570 Arabidopsis thaliana
AT5G11390 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3636571-3637570 Arabidopsis thaliana
AT5G11390 2.0kb upstream 2.0kb upstream 4904 true Chr5: 3631667-3636570 Arabidopsis thaliana
AT5G11390 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3631667-3633666 Arabidopsis thaliana
AT5G11390 2.0kb downstream 2.0kb downstream 4904 true Chr5: 3633667-3638570 Arabidopsis thaliana
AT5G11390 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3636571-3638570 Arabidopsis thaliana
AT5G11390 5.0kb upstream 5.0kb upstream 7904 true Chr5: 3628667-3636570 Arabidopsis thaliana
AT5G11390 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3628667-3633666 Arabidopsis thaliana
AT5G11390 5.0kb downstream 5.0kb downstream 7904 true Chr5: 3633667-3641570 Arabidopsis thaliana
AT5G11390 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3636571-3641570 Arabidopsis thaliana
AT5G11390 10.0kb upstream 10.0kb upstream 12904 true Chr5: 3623667-3636570 Arabidopsis thaliana
AT5G11390 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3623667-3633666 Arabidopsis thaliana
AT5G11390 10.0kb downstream 10.0kb downstream 12904 true Chr5: 3633667-3646570 Arabidopsis thaliana
AT5G11390 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3636571-3646570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366962 5261 Brassicaceae View MSA
123829356 5264 Brassicales-Malvales View MSA
124346797 5266 SBM View MSA
124238303 5268 Malvidae View MSA
124064704 5270 Rosid View MSA
123737146 5271 Pentapetalae View MSA
122786197 5272 Eudicot View MSA
122042229 5273 Angiosperm View MSA
121309938 5274 Embryophyte View MSA
123347566 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.271        
cufflinks 12.946        
cufflinks 5.727       Low
cufflinks 15.058       High
cufflinks 6.166        
cufflinks 12.554        

0 Strain