Gene : AT5G11220 A. thaliana TAIR10
Defline:  (1 of 4) PTHR33527:SF1 - F13O11.17 PROTEIN Genomic Order:  1045
Name:  ? AT5G11220 Secondary Identifier:  ? PAC:19669646
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11220 0.5kb upstream 0.5kb upstream 1422 true Chr5: 3576557-3577978 Arabidopsis thaliana
AT5G11220 0.5kb upstream 0.5kb upstream 500 false Chr5: 3576557-3577056 Arabidopsis thaliana
AT5G11220 0.5kb downstream 0.5kb downstream 1422 true Chr5: 3577057-3578478 Arabidopsis thaliana
AT5G11220 0.5kb downstream 0.5kb downstream 500 false Chr5: 3577979-3578478 Arabidopsis thaliana
AT5G11220 1.0kb upstream 1.0kb upstream 1922 true Chr5: 3576057-3577978 Arabidopsis thaliana
AT5G11220 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3576057-3577056 Arabidopsis thaliana
AT5G11220 1.0kb downstream 1.0kb downstream 1922 true Chr5: 3577057-3578978 Arabidopsis thaliana
AT5G11220 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3577979-3578978 Arabidopsis thaliana
AT5G11220 2.0kb upstream 2.0kb upstream 2922 true Chr5: 3575057-3577978 Arabidopsis thaliana
AT5G11220 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3575057-3577056 Arabidopsis thaliana
AT5G11220 2.0kb downstream 2.0kb downstream 2922 true Chr5: 3577057-3579978 Arabidopsis thaliana
AT5G11220 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3577979-3579978 Arabidopsis thaliana
AT5G11220 5.0kb upstream 5.0kb upstream 5922 true Chr5: 3572057-3577978 Arabidopsis thaliana
AT5G11220 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3572057-3577056 Arabidopsis thaliana
AT5G11220 5.0kb downstream 5.0kb downstream 5922 true Chr5: 3577057-3582978 Arabidopsis thaliana
AT5G11220 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3577979-3582978 Arabidopsis thaliana
AT5G11220 10.0kb upstream 10.0kb upstream 10922 true Chr5: 3567057-3577978 Arabidopsis thaliana
AT5G11220 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3567057-3577056 Arabidopsis thaliana
AT5G11220 10.0kb downstream 10.0kb downstream 10922 true Chr5: 3577057-3587978 Arabidopsis thaliana
AT5G11220 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3577979-3587978 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379662 5261 Brassicaceae View MSA
123831466 5264 Brassicales-Malvales View MSA
124341180 5266 SBM View MSA
124238165 5268 Malvidae View MSA
124068831 5270 Rosid View MSA
123747236 5271 Pentapetalae View MSA
122796366 5272 Eudicot View MSA
122048138 5273 Angiosperm View MSA
121310860 5274 Embryophyte View MSA
123348244 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain