Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-5980 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT5G11130 0.5kb upstream | 0.5kb | upstream | 2905 | true | Chr5: 3541820-3544724 | Arabidopsis thaliana |
AT5G11130 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr5: 3541820-3542319 | Arabidopsis thaliana |
AT5G11130 0.5kb downstream | 0.5kb | downstream | 2905 | true | Chr5: 3542320-3545224 | Arabidopsis thaliana |
AT5G11130 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr5: 3544725-3545224 | Arabidopsis thaliana |
AT5G11130 1.0kb upstream | 1.0kb | upstream | 3405 | true | Chr5: 3541320-3544724 | Arabidopsis thaliana |
AT5G11130 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr5: 3541320-3542319 | Arabidopsis thaliana |
AT5G11130 1.0kb downstream | 1.0kb | downstream | 3405 | true | Chr5: 3542320-3545724 | Arabidopsis thaliana |
AT5G11130 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr5: 3544725-3545724 | Arabidopsis thaliana |
AT5G11130 2.0kb upstream | 2.0kb | upstream | 4405 | true | Chr5: 3540320-3544724 | Arabidopsis thaliana |
AT5G11130 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr5: 3540320-3542319 | Arabidopsis thaliana |
AT5G11130 2.0kb downstream | 2.0kb | downstream | 4405 | true | Chr5: 3542320-3546724 | Arabidopsis thaliana |
AT5G11130 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr5: 3544725-3546724 | Arabidopsis thaliana |
AT5G11130 5.0kb upstream | 5.0kb | upstream | 7405 | true | Chr5: 3537320-3544724 | Arabidopsis thaliana |
AT5G11130 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr5: 3537320-3542319 | Arabidopsis thaliana |
AT5G11130 5.0kb downstream | 5.0kb | downstream | 7405 | true | Chr5: 3542320-3549724 | Arabidopsis thaliana |
AT5G11130 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr5: 3544725-3549724 | Arabidopsis thaliana |
AT5G11130 10.0kb upstream | 10.0kb | upstream | 12405 | true | Chr5: 3532320-3544724 | Arabidopsis thaliana |
AT5G11130 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr5: 3532320-3542319 | Arabidopsis thaliana |
AT5G11130 10.0kb downstream | 10.0kb | downstream | 12405 | true | Chr5: 3542320-3554724 | Arabidopsis thaliana |
AT5G11130 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr5: 3544725-3554724 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122376886 | 5261 | Brassicaceae | View MSA |
123838167 | 5264 | Brassicales-Malvales | View MSA |
124346203 | 5266 | SBM | View MSA |
124252793 | 5268 | Malvidae | View MSA |
124072198 | 5270 | Rosid | View MSA |
123751032 | 5271 | Pentapetalae | View MSA |
122797278 | 5272 | Eudicot | View MSA |
122050562 | 5273 | Angiosperm | View MSA |
121350610 | 5274 | Embryophyte | View MSA |
123428712 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.013 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.009 | Low | Low | ||
cufflinks | 0.022 | Low | |||
cufflinks | 0.034 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |