Gene : KNAT4 A. thaliana TAIR10
Primary Identifier:  ? AT5G11060 Defline:  (1 of 2) PTHR11850:SF122 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 3-RELATED
Genomic Order:  1030 Name:  ? AT5G11060
Secondary Identifier:  ? PAC:19670439
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11060 0.5kb upstream 0.5kb upstream 3688 true Chr5: 3509618-3513305 Arabidopsis thaliana
AT5G11060 0.5kb upstream 0.5kb upstream 500 false Chr5: 3509618-3510117 Arabidopsis thaliana
AT5G11060 0.5kb downstream 0.5kb downstream 3688 true Chr5: 3510118-3513805 Arabidopsis thaliana
AT5G11060 0.5kb downstream 0.5kb downstream 500 false Chr5: 3513306-3513805 Arabidopsis thaliana
AT5G11060 1.0kb upstream 1.0kb upstream 4188 true Chr5: 3509118-3513305 Arabidopsis thaliana
AT5G11060 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3509118-3510117 Arabidopsis thaliana
AT5G11060 1.0kb downstream 1.0kb downstream 4188 true Chr5: 3510118-3514305 Arabidopsis thaliana
AT5G11060 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3513306-3514305 Arabidopsis thaliana
AT5G11060 2.0kb upstream 2.0kb upstream 5188 true Chr5: 3508118-3513305 Arabidopsis thaliana
AT5G11060 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3508118-3510117 Arabidopsis thaliana
AT5G11060 2.0kb downstream 2.0kb downstream 5188 true Chr5: 3510118-3515305 Arabidopsis thaliana
AT5G11060 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3513306-3515305 Arabidopsis thaliana
AT5G11060 5.0kb upstream 5.0kb upstream 8188 true Chr5: 3505118-3513305 Arabidopsis thaliana
AT5G11060 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3505118-3510117 Arabidopsis thaliana
AT5G11060 5.0kb downstream 5.0kb downstream 8188 true Chr5: 3510118-3518305 Arabidopsis thaliana
AT5G11060 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3513306-3518305 Arabidopsis thaliana
AT5G11060 10.0kb upstream 10.0kb upstream 13188 true Chr5: 3500118-3513305 Arabidopsis thaliana
AT5G11060 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3500118-3510117 Arabidopsis thaliana
AT5G11060 10.0kb downstream 10.0kb downstream 13188 true Chr5: 3510118-3523305 Arabidopsis thaliana
AT5G11060 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3513306-3523305 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379545 5261 Brassicaceae View MSA
123837681 5264 Brassicales-Malvales View MSA
124342639 5266 SBM View MSA
124246060 5268 Malvidae View MSA
124065932 5270 Rosid View MSA
123749980 5271 Pentapetalae View MSA
122794355 5272 Eudicot View MSA
122041935 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.369     High High
cufflinks 4.267        
cufflinks 22.493        
cufflinks 4.981        
cufflinks 22.77        
cufflinks 3.585       Low

0 Strain