Gene : AT5G10970 A. thaliana TAIR10
Defline:  C2H2 and C2HC zinc fingers superfamily protein Genomic Order:  1020
Name:  ? AT5G10970 Secondary Identifier:  ? PAC:19670207
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10970 0.5kb upstream 0.5kb upstream 1319 true Chr5: 3468768-3470086 Arabidopsis thaliana
AT5G10970 0.5kb upstream 0.5kb upstream 500 false Chr5: 3468768-3469267 Arabidopsis thaliana
AT5G10970 0.5kb downstream 0.5kb downstream 1319 true Chr5: 3469268-3470586 Arabidopsis thaliana
AT5G10970 0.5kb downstream 0.5kb downstream 500 false Chr5: 3470087-3470586 Arabidopsis thaliana
AT5G10970 1.0kb upstream 1.0kb upstream 1819 true Chr5: 3468268-3470086 Arabidopsis thaliana
AT5G10970 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3468268-3469267 Arabidopsis thaliana
AT5G10970 1.0kb downstream 1.0kb downstream 1819 true Chr5: 3469268-3471086 Arabidopsis thaliana
AT5G10970 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3470087-3471086 Arabidopsis thaliana
AT5G10970 2.0kb upstream 2.0kb upstream 2819 true Chr5: 3467268-3470086 Arabidopsis thaliana
AT5G10970 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3467268-3469267 Arabidopsis thaliana
AT5G10970 2.0kb downstream 2.0kb downstream 2819 true Chr5: 3469268-3472086 Arabidopsis thaliana
AT5G10970 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3470087-3472086 Arabidopsis thaliana
AT5G10970 5.0kb upstream 5.0kb upstream 5819 true Chr5: 3464268-3470086 Arabidopsis thaliana
AT5G10970 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3464268-3469267 Arabidopsis thaliana
AT5G10970 5.0kb downstream 5.0kb downstream 5819 true Chr5: 3469268-3475086 Arabidopsis thaliana
AT5G10970 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3470087-3475086 Arabidopsis thaliana
AT5G10970 10.0kb upstream 10.0kb upstream 10819 true Chr5: 3459268-3470086 Arabidopsis thaliana
AT5G10970 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3459268-3469267 Arabidopsis thaliana
AT5G10970 10.0kb downstream 10.0kb downstream 10819 true Chr5: 3469268-3480086 Arabidopsis thaliana
AT5G10970 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3470087-3480086 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366351 5261 Brassicaceae View MSA
123838334 5264 Brassicales-Malvales View MSA
124341922 5266 SBM View MSA
124253974 5268 Malvidae View MSA
124070347 5270 Rosid View MSA
123745307 5271 Pentapetalae View MSA
122786799 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.577        
cufflinks 7.62        
cufflinks 0.489       Low
cufflinks 5.779        
cufflinks 0.484       Low
cufflinks 8.412        

0 Strain