Gene : AT5G10990 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31374//PTHR31374:SF34 - FAMILY NOT NAMED // F6F9.11 PROTEIN-RELATED Genomic Order:  1022
Name:  ? AT5G10990 Secondary Identifier:  ? PAC:19669678
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10990 0.5kb upstream 0.5kb upstream 1366 true Chr5: 3476339-3477704 Arabidopsis thaliana
AT5G10990 0.5kb upstream 0.5kb upstream 500 false Chr5: 3476339-3476838 Arabidopsis thaliana
AT5G10990 0.5kb downstream 0.5kb downstream 1366 true Chr5: 3476839-3478204 Arabidopsis thaliana
AT5G10990 0.5kb downstream 0.5kb downstream 500 false Chr5: 3477705-3478204 Arabidopsis thaliana
AT5G10990 1.0kb upstream 1.0kb upstream 1866 true Chr5: 3475839-3477704 Arabidopsis thaliana
AT5G10990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3475839-3476838 Arabidopsis thaliana
AT5G10990 1.0kb downstream 1.0kb downstream 1866 true Chr5: 3476839-3478704 Arabidopsis thaliana
AT5G10990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3477705-3478704 Arabidopsis thaliana
AT5G10990 2.0kb upstream 2.0kb upstream 2866 true Chr5: 3474839-3477704 Arabidopsis thaliana
AT5G10990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3474839-3476838 Arabidopsis thaliana
AT5G10990 2.0kb downstream 2.0kb downstream 2866 true Chr5: 3476839-3479704 Arabidopsis thaliana
AT5G10990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3477705-3479704 Arabidopsis thaliana
AT5G10990 5.0kb upstream 5.0kb upstream 5866 true Chr5: 3471839-3477704 Arabidopsis thaliana
AT5G10990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3471839-3476838 Arabidopsis thaliana
AT5G10990 5.0kb downstream 5.0kb downstream 5866 true Chr5: 3476839-3482704 Arabidopsis thaliana
AT5G10990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3477705-3482704 Arabidopsis thaliana
AT5G10990 10.0kb upstream 10.0kb upstream 10866 true Chr5: 3466839-3477704 Arabidopsis thaliana
AT5G10990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3466839-3476838 Arabidopsis thaliana
AT5G10990 10.0kb downstream 10.0kb downstream 10866 true Chr5: 3476839-3487704 Arabidopsis thaliana
AT5G10990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3477705-3487704 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371712 5261 Brassicaceae View MSA
123800217 5264 Brassicales-Malvales View MSA
124297659 5266 SBM View MSA
124149490 5268 Malvidae View MSA
123875291 5270 Rosid View MSA
123753658 5271 Pentapetalae View MSA
122788307 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083     Low  
cufflinks 0.175     Low  
cufflinks 0.077     Low  
cufflinks 0.481        
cufflinks 0.018     Low Low
cufflinks 0.834       High

0 Strain