Gene : AT5G11000 A. thaliana TAIR10
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1023
Name:  ? AT5G11000 Secondary Identifier:  ? PAC:19670916
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G11000 0.5kb upstream 0.5kb upstream 1897 true Chr5: 3479029-3480925 Arabidopsis thaliana
AT5G11000 0.5kb upstream 0.5kb upstream 500 false Chr5: 3480426-3480925 Arabidopsis thaliana
AT5G11000 0.5kb downstream 0.5kb downstream 1897 true Chr5: 3478529-3480425 Arabidopsis thaliana
AT5G11000 0.5kb downstream 0.5kb downstream 500 false Chr5: 3478529-3479028 Arabidopsis thaliana
AT5G11000 1.0kb upstream 1.0kb upstream 2397 true Chr5: 3479029-3481425 Arabidopsis thaliana
AT5G11000 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3480426-3481425 Arabidopsis thaliana
AT5G11000 1.0kb downstream 1.0kb downstream 2397 true Chr5: 3478029-3480425 Arabidopsis thaliana
AT5G11000 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3478029-3479028 Arabidopsis thaliana
AT5G11000 2.0kb upstream 2.0kb upstream 3397 true Chr5: 3479029-3482425 Arabidopsis thaliana
AT5G11000 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3480426-3482425 Arabidopsis thaliana
AT5G11000 2.0kb downstream 2.0kb downstream 3397 true Chr5: 3477029-3480425 Arabidopsis thaliana
AT5G11000 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3477029-3479028 Arabidopsis thaliana
AT5G11000 5.0kb upstream 5.0kb upstream 6397 true Chr5: 3479029-3485425 Arabidopsis thaliana
AT5G11000 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3480426-3485425 Arabidopsis thaliana
AT5G11000 5.0kb downstream 5.0kb downstream 6397 true Chr5: 3474029-3480425 Arabidopsis thaliana
AT5G11000 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3474029-3479028 Arabidopsis thaliana
AT5G11000 10.0kb upstream 10.0kb upstream 11397 true Chr5: 3479029-3490425 Arabidopsis thaliana
AT5G11000 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3480426-3490425 Arabidopsis thaliana
AT5G11000 10.0kb downstream 10.0kb downstream 11397 true Chr5: 3469029-3480425 Arabidopsis thaliana
AT5G11000 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3469029-3479028 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
122364175 5261 Brassicaceae View MSA
123834911 5264 Brassicales-Malvales View MSA
124339343 5266 SBM View MSA
124253516 5268 Malvidae View MSA
124064472 5270 Rosid View MSA
123743333 5271 Pentapetalae View MSA
122793790 5272 Eudicot View MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.247     High High
cufflinks 18.745        
cufflinks 19.709        
cufflinks 22.609        
cufflinks 19.934        
cufflinks 30.192     High  

0 Strain