Gene : AT5G10960 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10797//PTHR10797:SF14 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT // CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED Genomic Order:  1019
Name:  ? AT5G10960 Secondary Identifier:  ? PAC:19672239
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10960 0.5kb upstream 0.5kb upstream 1970 true Chr5: 3463718-3465687 Arabidopsis thaliana
AT5G10960 0.5kb upstream 0.5kb upstream 500 false Chr5: 3463718-3464217 Arabidopsis thaliana
AT5G10960 0.5kb downstream 0.5kb downstream 1970 true Chr5: 3464218-3466187 Arabidopsis thaliana
AT5G10960 0.5kb downstream 0.5kb downstream 500 false Chr5: 3465688-3466187 Arabidopsis thaliana
AT5G10960 1.0kb upstream 1.0kb upstream 2470 true Chr5: 3463218-3465687 Arabidopsis thaliana
AT5G10960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3463218-3464217 Arabidopsis thaliana
AT5G10960 1.0kb downstream 1.0kb downstream 2470 true Chr5: 3464218-3466687 Arabidopsis thaliana
AT5G10960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3465688-3466687 Arabidopsis thaliana
AT5G10960 2.0kb upstream 2.0kb upstream 3470 true Chr5: 3462218-3465687 Arabidopsis thaliana
AT5G10960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3462218-3464217 Arabidopsis thaliana
AT5G10960 2.0kb downstream 2.0kb downstream 3470 true Chr5: 3464218-3467687 Arabidopsis thaliana
AT5G10960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3465688-3467687 Arabidopsis thaliana
AT5G10960 5.0kb upstream 5.0kb upstream 6470 true Chr5: 3459218-3465687 Arabidopsis thaliana
AT5G10960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3459218-3464217 Arabidopsis thaliana
AT5G10960 5.0kb downstream 5.0kb downstream 6470 true Chr5: 3464218-3470687 Arabidopsis thaliana
AT5G10960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3465688-3470687 Arabidopsis thaliana
AT5G10960 10.0kb upstream 10.0kb upstream 11470 true Chr5: 3454218-3465687 Arabidopsis thaliana
AT5G10960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3454218-3464217 Arabidopsis thaliana
AT5G10960 10.0kb downstream 10.0kb downstream 11470 true Chr5: 3464218-3475687 Arabidopsis thaliana
AT5G10960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3465688-3475687 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374441 5261 Brassicaceae View MSA
123837045 5264 Brassicales-Malvales View MSA
124344697 5266 SBM View MSA
124249761 5268 Malvidae View MSA
124069772 5270 Rosid View MSA
123751121 5271 Pentapetalae View MSA
122791154 5272 Eudicot View MSA
122043623 5273 Angiosperm View MSA
123429113 5275 Viridiplantae View MSA
121348051 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 115.886     High  
cufflinks 124.836     High  
cufflinks 75.779     High Low
cufflinks 146.631     High High
cufflinks 80.499     High Low
cufflinks 140.528     High  

0 Strain