Gene : AT5G10605 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33603:SF1 - METHYLTRANSFERASE Genomic Order:  982
Name:  ? AT5G10605 Secondary Identifier:  ? PAC:19665428
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G10605 0.5kb upstream 0.5kb upstream 995 true Chr5: 3352898-3353892 Arabidopsis thaliana
AT5G10605 0.5kb upstream 0.5kb upstream 500 false Chr5: 3353393-3353892 Arabidopsis thaliana
AT5G10605 0.5kb downstream 0.5kb downstream 995 true Chr5: 3352398-3353392 Arabidopsis thaliana
AT5G10605 0.5kb downstream 0.5kb downstream 500 false Chr5: 3352398-3352897 Arabidopsis thaliana
AT5G10605 1.0kb upstream 1.0kb upstream 1495 true Chr5: 3352898-3354392 Arabidopsis thaliana
AT5G10605 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3353393-3354392 Arabidopsis thaliana
AT5G10605 1.0kb downstream 1.0kb downstream 1495 true Chr5: 3351898-3353392 Arabidopsis thaliana
AT5G10605 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3351898-3352897 Arabidopsis thaliana
AT5G10605 2.0kb upstream 2.0kb upstream 2495 true Chr5: 3352898-3355392 Arabidopsis thaliana
AT5G10605 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3353393-3355392 Arabidopsis thaliana
AT5G10605 2.0kb downstream 2.0kb downstream 2495 true Chr5: 3350898-3353392 Arabidopsis thaliana
AT5G10605 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3350898-3352897 Arabidopsis thaliana
AT5G10605 5.0kb upstream 5.0kb upstream 5495 true Chr5: 3352898-3358392 Arabidopsis thaliana
AT5G10605 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3353393-3358392 Arabidopsis thaliana
AT5G10605 5.0kb downstream 5.0kb downstream 5495 true Chr5: 3347898-3353392 Arabidopsis thaliana
AT5G10605 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3347898-3352897 Arabidopsis thaliana
AT5G10605 10.0kb upstream 10.0kb upstream 10495 true Chr5: 3352898-3363392 Arabidopsis thaliana
AT5G10605 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3353393-3363392 Arabidopsis thaliana
AT5G10605 10.0kb downstream 10.0kb downstream 10495 true Chr5: 3342898-3353392 Arabidopsis thaliana
AT5G10605 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3342898-3352897 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495009 5273 Angiosperm Singleton cluster - no MSA
122330880 5261 Brassicaceae Singleton cluster - no MSA
123772100 5264 Brassicales-Malvales Singleton cluster - no MSA
124270621 5266 SBM Singleton cluster - no MSA
124126683 5268 Malvidae Singleton cluster - no MSA
123855579 5270 Rosid Singleton cluster - no MSA
123441549 5271 Pentapetalae Singleton cluster - no MSA
122477133 5272 Eudicot Singleton cluster - no MSA
120768376 5274 Embryophyte Singleton cluster - no MSA
122810764 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.741       High
cufflinks 1.118        
cufflinks 0.675        
cufflinks 1.134        
cufflinks 0.477       Low
cufflinks 0.801        

0 Strain