Gene : AT5G13950 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13052//PTHR13052:SF2 - NFRKB-RELATED Genomic Order:  1290
Name:  ? AT5G13950 Secondary Identifier:  ? PAC:19673044
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13950 0.5kb upstream 0.5kb upstream 5255 true Chr5: 4495971-4501225 Arabidopsis thaliana
AT5G13950 0.5kb upstream 0.5kb upstream 500 false Chr5: 4500726-4501225 Arabidopsis thaliana
AT5G13950 0.5kb downstream 0.5kb downstream 5255 true Chr5: 4495471-4500725 Arabidopsis thaliana
AT5G13950 0.5kb downstream 0.5kb downstream 500 false Chr5: 4495471-4495970 Arabidopsis thaliana
AT5G13950 1.0kb upstream 1.0kb upstream 5755 true Chr5: 4495971-4501725 Arabidopsis thaliana
AT5G13950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4500726-4501725 Arabidopsis thaliana
AT5G13950 1.0kb downstream 1.0kb downstream 5755 true Chr5: 4494971-4500725 Arabidopsis thaliana
AT5G13950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4494971-4495970 Arabidopsis thaliana
AT5G13950 2.0kb upstream 2.0kb upstream 6755 true Chr5: 4495971-4502725 Arabidopsis thaliana
AT5G13950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4500726-4502725 Arabidopsis thaliana
AT5G13950 2.0kb downstream 2.0kb downstream 6755 true Chr5: 4493971-4500725 Arabidopsis thaliana
AT5G13950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4493971-4495970 Arabidopsis thaliana
AT5G13950 5.0kb upstream 5.0kb upstream 9755 true Chr5: 4495971-4505725 Arabidopsis thaliana
AT5G13950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4500726-4505725 Arabidopsis thaliana
AT5G13950 5.0kb downstream 5.0kb downstream 9755 true Chr5: 4490971-4500725 Arabidopsis thaliana
AT5G13950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4490971-4495970 Arabidopsis thaliana
AT5G13950 10.0kb upstream 10.0kb upstream 14755 true Chr5: 4495971-4510725 Arabidopsis thaliana
AT5G13950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4500726-4510725 Arabidopsis thaliana
AT5G13950 10.0kb downstream 10.0kb downstream 14755 true Chr5: 4485971-4500725 Arabidopsis thaliana
AT5G13950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4485971-4495970 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372984 5261 Brassicaceae View MSA
123835133 5264 Brassicales-Malvales View MSA
124337326 5266 SBM View MSA
124242345 5268 Malvidae View MSA
124071265 5270 Rosid View MSA
123736774 5271 Pentapetalae View MSA
122769878 5272 Eudicot View MSA
122049925 5273 Angiosperm View MSA
121349740 5274 Embryophyte View MSA
123381421 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.234        
cufflinks 2.505        
cufflinks 5.185        
cufflinks 2.916        
cufflinks 5.86       High
cufflinks 2.196       Low

0 Strain