Gene : LEP A. thaliana TAIR10
Primary Identifier:  ? AT5G13910 Defline:  (1 of 1) PTHR31677//PTHR31677:SF5 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP
Genomic Order:  1285 Name:  ? AT5G13910
Secondary Identifier:  ? PAC:19672446
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13910 0.5kb upstream 0.5kb upstream 1136 true Chr5: 4482450-4483585 Arabidopsis thaliana
AT5G13910 0.5kb upstream 0.5kb upstream 500 false Chr5: 4483086-4483585 Arabidopsis thaliana
AT5G13910 0.5kb downstream 0.5kb downstream 1136 true Chr5: 4481950-4483085 Arabidopsis thaliana
AT5G13910 0.5kb downstream 0.5kb downstream 500 false Chr5: 4481950-4482449 Arabidopsis thaliana
AT5G13910 1.0kb upstream 1.0kb upstream 1636 true Chr5: 4482450-4484085 Arabidopsis thaliana
AT5G13910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4483086-4484085 Arabidopsis thaliana
AT5G13910 1.0kb downstream 1.0kb downstream 1636 true Chr5: 4481450-4483085 Arabidopsis thaliana
AT5G13910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4481450-4482449 Arabidopsis thaliana
AT5G13910 2.0kb upstream 2.0kb upstream 2636 true Chr5: 4482450-4485085 Arabidopsis thaliana
AT5G13910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4483086-4485085 Arabidopsis thaliana
AT5G13910 2.0kb downstream 2.0kb downstream 2636 true Chr5: 4480450-4483085 Arabidopsis thaliana
AT5G13910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4480450-4482449 Arabidopsis thaliana
AT5G13910 5.0kb upstream 5.0kb upstream 5636 true Chr5: 4482450-4488085 Arabidopsis thaliana
AT5G13910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4483086-4488085 Arabidopsis thaliana
AT5G13910 5.0kb downstream 5.0kb downstream 5636 true Chr5: 4477450-4483085 Arabidopsis thaliana
AT5G13910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4477450-4482449 Arabidopsis thaliana
AT5G13910 10.0kb upstream 10.0kb upstream 10636 true Chr5: 4482450-4493085 Arabidopsis thaliana
AT5G13910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4483086-4493085 Arabidopsis thaliana
AT5G13910 10.0kb downstream 10.0kb downstream 10636 true Chr5: 4472450-4483085 Arabidopsis thaliana
AT5G13910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4472450-4482449 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377368 5261 Brassicaceae View MSA
123840869 5264 Brassicales-Malvales View MSA
124347064 5266 SBM View MSA
124251751 5268 Malvidae View MSA
124065469 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.091     Low  
cufflinks 1.858        
cufflinks 0.049     Low  
cufflinks 3.884       High
cufflinks 0.035     Low Low
cufflinks 3.611        

0 Strain