Gene : AT5G13650 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23115:SF165 - TYPA-LIKE TRANSLATION ELONGATION FACTOR SVR3-RELATED Genomic Order:  1258
Name:  ? AT5G13650 Secondary Identifier:  ? PAC:19669692
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13650 0.5kb upstream 0.5kb upstream 5447 true Chr5: 4397246-4402692 Arabidopsis thaliana
AT5G13650 0.5kb upstream 0.5kb upstream 500 false Chr5: 4397246-4397745 Arabidopsis thaliana
AT5G13650 0.5kb downstream 0.5kb downstream 5447 true Chr5: 4397746-4403192 Arabidopsis thaliana
AT5G13650 0.5kb downstream 0.5kb downstream 500 false Chr5: 4402693-4403192 Arabidopsis thaliana
AT5G13650 1.0kb upstream 1.0kb upstream 5947 true Chr5: 4396746-4402692 Arabidopsis thaliana
AT5G13650 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4396746-4397745 Arabidopsis thaliana
AT5G13650 1.0kb downstream 1.0kb downstream 5947 true Chr5: 4397746-4403692 Arabidopsis thaliana
AT5G13650 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4402693-4403692 Arabidopsis thaliana
AT5G13650 2.0kb upstream 2.0kb upstream 6947 true Chr5: 4395746-4402692 Arabidopsis thaliana
AT5G13650 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4395746-4397745 Arabidopsis thaliana
AT5G13650 2.0kb downstream 2.0kb downstream 6947 true Chr5: 4397746-4404692 Arabidopsis thaliana
AT5G13650 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4402693-4404692 Arabidopsis thaliana
AT5G13650 5.0kb upstream 5.0kb upstream 9947 true Chr5: 4392746-4402692 Arabidopsis thaliana
AT5G13650 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4392746-4397745 Arabidopsis thaliana
AT5G13650 5.0kb downstream 5.0kb downstream 9947 true Chr5: 4397746-4407692 Arabidopsis thaliana
AT5G13650 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4402693-4407692 Arabidopsis thaliana
AT5G13650 10.0kb upstream 10.0kb upstream 14947 true Chr5: 4387746-4402692 Arabidopsis thaliana
AT5G13650 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4387746-4397745 Arabidopsis thaliana
AT5G13650 10.0kb downstream 10.0kb downstream 14947 true Chr5: 4397746-4412692 Arabidopsis thaliana
AT5G13650 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4402693-4412692 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377426 5261 Brassicaceae View MSA
123830085 5264 Brassicales-Malvales View MSA
124342532 5266 SBM View MSA
124253270 5268 Malvidae View MSA
124067913 5270 Rosid View MSA
123740799 5271 Pentapetalae View MSA
122792956 5272 Eudicot View MSA
122047839 5273 Angiosperm View MSA
121347547 5274 Embryophyte View MSA
123425076 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.955     High High
cufflinks 6.792        
cufflinks 51.304     High  
cufflinks 6.657        
cufflinks 40.73     High  
cufflinks 4.907       Low

0 Strain