Gene : IQD11 A. thaliana TAIR10
Primary Identifier:  ? AT5G13460 Defline:  (1 of 1) PTHR32295:SF35 - PROTEIN IQ-DOMAIN 11
Genomic Order:  1240 Name:  ? AT5G13460
Secondary Identifier:  ? PAC:19668618
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13460 0.5kb upstream 0.5kb upstream 3102 true Chr5: 4315259-4318360 Arabidopsis thaliana
AT5G13460 0.5kb upstream 0.5kb upstream 500 false Chr5: 4315259-4315758 Arabidopsis thaliana
AT5G13460 0.5kb downstream 0.5kb downstream 3102 true Chr5: 4315759-4318860 Arabidopsis thaliana
AT5G13460 0.5kb downstream 0.5kb downstream 500 false Chr5: 4318361-4318860 Arabidopsis thaliana
AT5G13460 1.0kb upstream 1.0kb upstream 3602 true Chr5: 4314759-4318360 Arabidopsis thaliana
AT5G13460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4314759-4315758 Arabidopsis thaliana
AT5G13460 1.0kb downstream 1.0kb downstream 3602 true Chr5: 4315759-4319360 Arabidopsis thaliana
AT5G13460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4318361-4319360 Arabidopsis thaliana
AT5G13460 2.0kb upstream 2.0kb upstream 4602 true Chr5: 4313759-4318360 Arabidopsis thaliana
AT5G13460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4313759-4315758 Arabidopsis thaliana
AT5G13460 2.0kb downstream 2.0kb downstream 4602 true Chr5: 4315759-4320360 Arabidopsis thaliana
AT5G13460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4318361-4320360 Arabidopsis thaliana
AT5G13460 5.0kb upstream 5.0kb upstream 7602 true Chr5: 4310759-4318360 Arabidopsis thaliana
AT5G13460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4310759-4315758 Arabidopsis thaliana
AT5G13460 5.0kb downstream 5.0kb downstream 7602 true Chr5: 4315759-4323360 Arabidopsis thaliana
AT5G13460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4318361-4323360 Arabidopsis thaliana
AT5G13460 10.0kb upstream 10.0kb upstream 12602 true Chr5: 4305759-4318360 Arabidopsis thaliana
AT5G13460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4305759-4315758 Arabidopsis thaliana
AT5G13460 10.0kb downstream 10.0kb downstream 12602 true Chr5: 4315759-4328360 Arabidopsis thaliana
AT5G13460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4318361-4328360 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366526 5261 Brassicaceae View MSA
123834501 5264 Brassicales-Malvales View MSA
124345092 5266 SBM View MSA
124239176 5268 Malvidae View MSA
124062975 5270 Rosid View MSA
123737265 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.555        
cufflinks 7.694        
cufflinks 6.108        
cufflinks 9.288       High
cufflinks 5.5       Low
cufflinks 8.642        

0 Strain