Gene : AT5G13030 A. thaliana TAIR10
Defline:  (1 of 1) PF02696 - Uncharacterized ACR, YdiU/UPF0061 family (UPF0061) Genomic Order:  1197
Name:  ? AT5G13030 Secondary Identifier:  ? PAC:19668831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13030 0.5kb upstream 0.5kb upstream 3985 true Chr5: 4132704-4136688 Arabidopsis thaliana
AT5G13030 0.5kb upstream 0.5kb upstream 500 false Chr5: 4132704-4133203 Arabidopsis thaliana
AT5G13030 0.5kb downstream 0.5kb downstream 3985 true Chr5: 4133204-4137188 Arabidopsis thaliana
AT5G13030 0.5kb downstream 0.5kb downstream 500 false Chr5: 4136689-4137188 Arabidopsis thaliana
AT5G13030 1.0kb upstream 1.0kb upstream 4485 true Chr5: 4132204-4136688 Arabidopsis thaliana
AT5G13030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4132204-4133203 Arabidopsis thaliana
AT5G13030 1.0kb downstream 1.0kb downstream 4485 true Chr5: 4133204-4137688 Arabidopsis thaliana
AT5G13030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4136689-4137688 Arabidopsis thaliana
AT5G13030 2.0kb upstream 2.0kb upstream 5485 true Chr5: 4131204-4136688 Arabidopsis thaliana
AT5G13030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4131204-4133203 Arabidopsis thaliana
AT5G13030 2.0kb downstream 2.0kb downstream 5485 true Chr5: 4133204-4138688 Arabidopsis thaliana
AT5G13030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4136689-4138688 Arabidopsis thaliana
AT5G13030 5.0kb upstream 5.0kb upstream 8485 true Chr5: 4128204-4136688 Arabidopsis thaliana
AT5G13030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4128204-4133203 Arabidopsis thaliana
AT5G13030 5.0kb downstream 5.0kb downstream 8485 true Chr5: 4133204-4141688 Arabidopsis thaliana
AT5G13030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4136689-4141688 Arabidopsis thaliana
AT5G13030 10.0kb upstream 10.0kb upstream 13485 true Chr5: 4123204-4136688 Arabidopsis thaliana
AT5G13030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4123204-4133203 Arabidopsis thaliana
AT5G13030 10.0kb downstream 10.0kb downstream 13485 true Chr5: 4133204-4146688 Arabidopsis thaliana
AT5G13030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4136689-4146688 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360983 5261 Brassicaceae View MSA
123831800 5264 Brassicales-Malvales View MSA
124343220 5266 SBM View MSA
124239426 5268 Malvidae View MSA
124061582 5270 Rosid View MSA
123745250 5271 Pentapetalae View MSA
122785690 5272 Eudicot View MSA
122044694 5273 Angiosperm View MSA
123428896 5275 Viridiplantae View MSA
121346757 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.879     High High
cufflinks 17.009        
cufflinks 36.959     High  
cufflinks 18.163        
cufflinks 40.377     High  
cufflinks 17.88        

0 Strain