Gene : DiT1 A. thaliana TAIR10
Primary Identifier:  ? AT5G12860 Defline:  (1 of 1) PTHR10283:SF76 - DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC
Genomic Order:  1180 Name:  ? AT5G12860
Secondary Identifier:  ? PAC:19671293
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12860 0.5kb upstream 0.5kb upstream 2765 true Chr5: 4059686-4062450 Arabidopsis thaliana
AT5G12860 0.5kb upstream 0.5kb upstream 500 false Chr5: 4061951-4062450 Arabidopsis thaliana
AT5G12860 0.5kb downstream 0.5kb downstream 2765 true Chr5: 4059186-4061950 Arabidopsis thaliana
AT5G12860 0.5kb downstream 0.5kb downstream 500 false Chr5: 4059186-4059685 Arabidopsis thaliana
AT5G12860 1.0kb upstream 1.0kb upstream 3265 true Chr5: 4059686-4062950 Arabidopsis thaliana
AT5G12860 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4061951-4062950 Arabidopsis thaliana
AT5G12860 1.0kb downstream 1.0kb downstream 3265 true Chr5: 4058686-4061950 Arabidopsis thaliana
AT5G12860 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4058686-4059685 Arabidopsis thaliana
AT5G12860 2.0kb upstream 2.0kb upstream 4265 true Chr5: 4059686-4063950 Arabidopsis thaliana
AT5G12860 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4061951-4063950 Arabidopsis thaliana
AT5G12860 2.0kb downstream 2.0kb downstream 4265 true Chr5: 4057686-4061950 Arabidopsis thaliana
AT5G12860 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4057686-4059685 Arabidopsis thaliana
AT5G12860 5.0kb upstream 5.0kb upstream 7265 true Chr5: 4059686-4066950 Arabidopsis thaliana
AT5G12860 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4061951-4066950 Arabidopsis thaliana
AT5G12860 5.0kb downstream 5.0kb downstream 7265 true Chr5: 4054686-4061950 Arabidopsis thaliana
AT5G12860 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4054686-4059685 Arabidopsis thaliana
AT5G12860 10.0kb upstream 10.0kb upstream 12265 true Chr5: 4059686-4071950 Arabidopsis thaliana
AT5G12860 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4061951-4071950 Arabidopsis thaliana
AT5G12860 10.0kb downstream 10.0kb downstream 12265 true Chr5: 4049686-4061950 Arabidopsis thaliana
AT5G12860 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4049686-4059685 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373838 5261 Brassicaceae View MSA
123831050 5264 Brassicales-Malvales View MSA
124343299 5266 SBM View MSA
124253843 5268 Malvidae View MSA
124069174 5270 Rosid View MSA
123743248 5271 Pentapetalae View MSA
122791234 5272 Eudicot View MSA
122043898 5273 Angiosperm View MSA
121349578 5274 Embryophyte View MSA
123427902 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.951     High High
cufflinks 10.966       Low
cufflinks 63.085     High High
cufflinks 13.655        
cufflinks 45.7     High  
cufflinks 12.032        

0 Strain