Gene : SEC10 A. thaliana TAIR10
Primary Identifier:  ? AT5G12370 Defline:  (1 of 1) PTHR12100 - SEC10
Genomic Order:  1166 Name:  ? AT5G12370
Secondary Identifier:  ? PAC:19667470
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12370 0.5kb upstream 0.5kb upstream 6530 true Chr5: 4002775-4009304 Arabidopsis thaliana
AT5G12370 0.5kb upstream 0.5kb upstream 500 false Chr5: 4008805-4009304 Arabidopsis thaliana
AT5G12370 0.5kb downstream 0.5kb downstream 6530 true Chr5: 4002275-4008804 Arabidopsis thaliana
AT5G12370 0.5kb downstream 0.5kb downstream 500 false Chr5: 4002275-4002774 Arabidopsis thaliana
AT5G12370 1.0kb upstream 1.0kb upstream 7030 true Chr5: 4002775-4009804 Arabidopsis thaliana
AT5G12370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4008805-4009804 Arabidopsis thaliana
AT5G12370 1.0kb downstream 1.0kb downstream 7030 true Chr5: 4001775-4008804 Arabidopsis thaliana
AT5G12370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4001775-4002774 Arabidopsis thaliana
AT5G12370 2.0kb upstream 2.0kb upstream 8030 true Chr5: 4002775-4010804 Arabidopsis thaliana
AT5G12370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4008805-4010804 Arabidopsis thaliana
AT5G12370 2.0kb downstream 2.0kb downstream 8030 true Chr5: 4000775-4008804 Arabidopsis thaliana
AT5G12370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4000775-4002774 Arabidopsis thaliana
AT5G12370 5.0kb upstream 5.0kb upstream 11030 true Chr5: 4002775-4013804 Arabidopsis thaliana
AT5G12370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4008805-4013804 Arabidopsis thaliana
AT5G12370 5.0kb downstream 5.0kb downstream 11030 true Chr5: 3997775-4008804 Arabidopsis thaliana
AT5G12370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3997775-4002774 Arabidopsis thaliana
AT5G12370 10.0kb upstream 10.0kb upstream 16030 true Chr5: 4002775-4018804 Arabidopsis thaliana
AT5G12370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4008805-4018804 Arabidopsis thaliana
AT5G12370 10.0kb downstream 10.0kb downstream 16030 true Chr5: 3992775-4008804 Arabidopsis thaliana
AT5G12370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3992775-4002774 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362744 5261 Brassicaceae View MSA
123833528 5264 Brassicales-Malvales View MSA
124344540 5266 SBM View MSA
124248211 5268 Malvidae View MSA
124068923 5270 Rosid View MSA
123739116 5271 Pentapetalae View MSA
122790579 5272 Eudicot View MSA
122042742 5273 Angiosperm View MSA
121350027 5274 Embryophyte View MSA
123428595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.714        
cufflinks 7.384        
cufflinks 5.498       Low
cufflinks 7.65        
cufflinks 5.894        
cufflinks 8.318       High

0 Strain