Gene : AT5G12410 A. thaliana TAIR10
Defline:  (1 of 1) K06963 - tRNA acetyltransferase TAN1 (TAN1, THUMPD1) Genomic Order:  1170
Name:  ? AT5G12410 Secondary Identifier:  ? PAC:19669301
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12410 0.5kb upstream 0.5kb upstream 2674 true Chr5: 4021815-4024488 Arabidopsis thaliana
AT5G12410 0.5kb upstream 0.5kb upstream 500 false Chr5: 4023989-4024488 Arabidopsis thaliana
AT5G12410 0.5kb downstream 0.5kb downstream 2674 true Chr5: 4021315-4023988 Arabidopsis thaliana
AT5G12410 0.5kb downstream 0.5kb downstream 500 false Chr5: 4021315-4021814 Arabidopsis thaliana
AT5G12410 1.0kb upstream 1.0kb upstream 3174 true Chr5: 4021815-4024988 Arabidopsis thaliana
AT5G12410 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4023989-4024988 Arabidopsis thaliana
AT5G12410 1.0kb downstream 1.0kb downstream 3174 true Chr5: 4020815-4023988 Arabidopsis thaliana
AT5G12410 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4020815-4021814 Arabidopsis thaliana
AT5G12410 2.0kb upstream 2.0kb upstream 4174 true Chr5: 4021815-4025988 Arabidopsis thaliana
AT5G12410 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4023989-4025988 Arabidopsis thaliana
AT5G12410 2.0kb downstream 2.0kb downstream 4174 true Chr5: 4019815-4023988 Arabidopsis thaliana
AT5G12410 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4019815-4021814 Arabidopsis thaliana
AT5G12410 5.0kb upstream 5.0kb upstream 7174 true Chr5: 4021815-4028988 Arabidopsis thaliana
AT5G12410 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4023989-4028988 Arabidopsis thaliana
AT5G12410 5.0kb downstream 5.0kb downstream 7174 true Chr5: 4016815-4023988 Arabidopsis thaliana
AT5G12410 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4016815-4021814 Arabidopsis thaliana
AT5G12410 10.0kb upstream 10.0kb upstream 12174 true Chr5: 4021815-4033988 Arabidopsis thaliana
AT5G12410 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4023989-4033988 Arabidopsis thaliana
AT5G12410 10.0kb downstream 10.0kb downstream 12174 true Chr5: 4011815-4023988 Arabidopsis thaliana
AT5G12410 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4011815-4021814 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378891 5261 Brassicaceae View MSA
123827722 5264 Brassicales-Malvales View MSA
124337230 5266 SBM View MSA
124239214 5268 Malvidae View MSA
124062685 5270 Rosid View MSA
123737559 5271 Pentapetalae View MSA
122790815 5272 Eudicot View MSA
122045180 5273 Angiosperm View MSA
121346491 5274 Embryophyte View MSA
123424372 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.444        
cufflinks 22.824        
cufflinks 12.759        
cufflinks 24.473       High
cufflinks 11.869       Low
cufflinks 20.623        

0 Strain