Gene : AT5G12320 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24193//PTHR24193:SF83 - ANKYRIN REPEAT PROTEIN // ANKYRIN REPEAT-CONTAINING PROTEIN Genomic Order:  1160
Name:  ? AT5G12320 Secondary Identifier:  ? PAC:19670055
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G12320 0.5kb upstream 0.5kb upstream 1895 true Chr5: 3982184-3984078 Arabidopsis thaliana
AT5G12320 0.5kb upstream 0.5kb upstream 500 false Chr5: 3982184-3982683 Arabidopsis thaliana
AT5G12320 0.5kb downstream 0.5kb downstream 1895 true Chr5: 3982684-3984578 Arabidopsis thaliana
AT5G12320 0.5kb downstream 0.5kb downstream 500 false Chr5: 3984079-3984578 Arabidopsis thaliana
AT5G12320 1.0kb upstream 1.0kb upstream 2395 true Chr5: 3981684-3984078 Arabidopsis thaliana
AT5G12320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3981684-3982683 Arabidopsis thaliana
AT5G12320 1.0kb downstream 1.0kb downstream 2395 true Chr5: 3982684-3985078 Arabidopsis thaliana
AT5G12320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3984079-3985078 Arabidopsis thaliana
AT5G12320 2.0kb upstream 2.0kb upstream 3395 true Chr5: 3980684-3984078 Arabidopsis thaliana
AT5G12320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3980684-3982683 Arabidopsis thaliana
AT5G12320 2.0kb downstream 2.0kb downstream 3395 true Chr5: 3982684-3986078 Arabidopsis thaliana
AT5G12320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3984079-3986078 Arabidopsis thaliana
AT5G12320 5.0kb upstream 5.0kb upstream 6395 true Chr5: 3977684-3984078 Arabidopsis thaliana
AT5G12320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3977684-3982683 Arabidopsis thaliana
AT5G12320 5.0kb downstream 5.0kb downstream 6395 true Chr5: 3982684-3989078 Arabidopsis thaliana
AT5G12320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3984079-3989078 Arabidopsis thaliana
AT5G12320 10.0kb upstream 10.0kb upstream 11395 true Chr5: 3972684-3984078 Arabidopsis thaliana
AT5G12320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3972684-3982683 Arabidopsis thaliana
AT5G12320 10.0kb downstream 10.0kb downstream 11395 true Chr5: 3982684-3994078 Arabidopsis thaliana
AT5G12320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3984079-3994078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373770 5261 Brassicaceae View MSA
123832982 5264 Brassicales-Malvales View MSA
124339568 5266 SBM View MSA
124240963 5268 Malvidae View MSA
124064792 5270 Rosid View MSA
123738973 5271 Pentapetalae View MSA
122785979 5272 Eudicot View MSA
122045417 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346975 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.174        
cufflinks 9.653        
cufflinks 6.387       Low
cufflinks 9.284        
cufflinks 6.536       Low
cufflinks 9.696        

0 Strain