Gene : SP1L4 A. thaliana TAIR10
Primary Identifier:  ? AT5G15600 Defline:  (1 of 2) PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED
Genomic Order:  1457 Name:  ? AT5G15600
Secondary Identifier:  ? PAC:19670335
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15600 0.5kb upstream 0.5kb upstream 1392 true Chr5: 5077700-5079091 Arabidopsis thaliana
AT5G15600 0.5kb upstream 0.5kb upstream 500 false Chr5: 5077700-5078199 Arabidopsis thaliana
AT5G15600 0.5kb downstream 0.5kb downstream 1392 true Chr5: 5078200-5079591 Arabidopsis thaliana
AT5G15600 0.5kb downstream 0.5kb downstream 500 false Chr5: 5079092-5079591 Arabidopsis thaliana
AT5G15600 1.0kb upstream 1.0kb upstream 1892 true Chr5: 5077200-5079091 Arabidopsis thaliana
AT5G15600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5077200-5078199 Arabidopsis thaliana
AT5G15600 1.0kb downstream 1.0kb downstream 1892 true Chr5: 5078200-5080091 Arabidopsis thaliana
AT5G15600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5079092-5080091 Arabidopsis thaliana
AT5G15600 2.0kb upstream 2.0kb upstream 2892 true Chr5: 5076200-5079091 Arabidopsis thaliana
AT5G15600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5076200-5078199 Arabidopsis thaliana
AT5G15600 2.0kb downstream 2.0kb downstream 2892 true Chr5: 5078200-5081091 Arabidopsis thaliana
AT5G15600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5079092-5081091 Arabidopsis thaliana
AT5G15600 5.0kb upstream 5.0kb upstream 5892 true Chr5: 5073200-5079091 Arabidopsis thaliana
AT5G15600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5073200-5078199 Arabidopsis thaliana
AT5G15600 5.0kb downstream 5.0kb downstream 5892 true Chr5: 5078200-5084091 Arabidopsis thaliana
AT5G15600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5079092-5084091 Arabidopsis thaliana
AT5G15600 10.0kb upstream 10.0kb upstream 10892 true Chr5: 5068200-5079091 Arabidopsis thaliana
AT5G15600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5068200-5078199 Arabidopsis thaliana
AT5G15600 10.0kb downstream 10.0kb downstream 10892 true Chr5: 5078200-5089091 Arabidopsis thaliana
AT5G15600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5079092-5089091 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343316 5261 Brassicaceae View MSA
123838111 5264 Brassicales-Malvales View MSA
124348761 5266 SBM View MSA
124253135 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.349        
cufflinks 5.311        
cufflinks 0.162     Low Low
cufflinks 5.713        
cufflinks 0.148     Low Low
cufflinks 8.455       High

0 Strain