Gene : BCCP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G15530 Defline:  (1 of 1) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  1450 Name:  ? AT5G15530
Secondary Identifier:  ? PAC:19670494
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1264 Arabidopsis thaliana pathologic  
Athaliana PWY-4381 Arabidopsis thaliana pathologic  
Athaliana PWY-5156 Arabidopsis thaliana pathologic  
Athaliana PWY-7388 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15530 0.5kb upstream 0.5kb upstream 2590 true Chr5: 5038251-5040840 Arabidopsis thaliana
AT5G15530 0.5kb upstream 0.5kb upstream 500 false Chr5: 5038251-5038750 Arabidopsis thaliana
AT5G15530 0.5kb downstream 0.5kb downstream 2590 true Chr5: 5038751-5041340 Arabidopsis thaliana
AT5G15530 0.5kb downstream 0.5kb downstream 500 false Chr5: 5040841-5041340 Arabidopsis thaliana
AT5G15530 1.0kb upstream 1.0kb upstream 3090 true Chr5: 5037751-5040840 Arabidopsis thaliana
AT5G15530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5037751-5038750 Arabidopsis thaliana
AT5G15530 1.0kb downstream 1.0kb downstream 3090 true Chr5: 5038751-5041840 Arabidopsis thaliana
AT5G15530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5040841-5041840 Arabidopsis thaliana
AT5G15530 2.0kb upstream 2.0kb upstream 4090 true Chr5: 5036751-5040840 Arabidopsis thaliana
AT5G15530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5036751-5038750 Arabidopsis thaliana
AT5G15530 2.0kb downstream 2.0kb downstream 4090 true Chr5: 5038751-5042840 Arabidopsis thaliana
AT5G15530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5040841-5042840 Arabidopsis thaliana
AT5G15530 5.0kb upstream 5.0kb upstream 7090 true Chr5: 5033751-5040840 Arabidopsis thaliana
AT5G15530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5033751-5038750 Arabidopsis thaliana
AT5G15530 5.0kb downstream 5.0kb downstream 7090 true Chr5: 5038751-5045840 Arabidopsis thaliana
AT5G15530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5040841-5045840 Arabidopsis thaliana
AT5G15530 10.0kb upstream 10.0kb upstream 12090 true Chr5: 5028751-5040840 Arabidopsis thaliana
AT5G15530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5028751-5038750 Arabidopsis thaliana
AT5G15530 10.0kb downstream 10.0kb downstream 12090 true Chr5: 5038751-5050840 Arabidopsis thaliana
AT5G15530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5040841-5050840 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374831 5261 Brassicaceae View MSA
123836808 5264 Brassicales-Malvales View MSA
124350225 5266 SBM View MSA
124244588 5268 Malvidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75        
cufflinks 9.822        
cufflinks 2.444        
cufflinks 15.932        
cufflinks 2.208        
cufflinks 18.65       High

0 Strain