Gene : AT5G15240 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  1420
Name:  ? AT5G15240 Secondary Identifier:  ? PAC:19670663
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15240 0.5kb upstream 0.5kb upstream 3174 true Chr5: 4947167-4950340 Arabidopsis thaliana
AT5G15240 0.5kb upstream 0.5kb upstream 500 false Chr5: 4947167-4947666 Arabidopsis thaliana
AT5G15240 0.5kb downstream 0.5kb downstream 3174 true Chr5: 4947667-4950840 Arabidopsis thaliana
AT5G15240 0.5kb downstream 0.5kb downstream 500 false Chr5: 4950341-4950840 Arabidopsis thaliana
AT5G15240 1.0kb upstream 1.0kb upstream 3674 true Chr5: 4946667-4950340 Arabidopsis thaliana
AT5G15240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4946667-4947666 Arabidopsis thaliana
AT5G15240 1.0kb downstream 1.0kb downstream 3674 true Chr5: 4947667-4951340 Arabidopsis thaliana
AT5G15240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4950341-4951340 Arabidopsis thaliana
AT5G15240 2.0kb upstream 2.0kb upstream 4674 true Chr5: 4945667-4950340 Arabidopsis thaliana
AT5G15240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4945667-4947666 Arabidopsis thaliana
AT5G15240 2.0kb downstream 2.0kb downstream 4674 true Chr5: 4947667-4952340 Arabidopsis thaliana
AT5G15240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4950341-4952340 Arabidopsis thaliana
AT5G15240 5.0kb upstream 5.0kb upstream 7674 true Chr5: 4942667-4950340 Arabidopsis thaliana
AT5G15240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4942667-4947666 Arabidopsis thaliana
AT5G15240 5.0kb downstream 5.0kb downstream 7674 true Chr5: 4947667-4955340 Arabidopsis thaliana
AT5G15240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4950341-4955340 Arabidopsis thaliana
AT5G15240 10.0kb upstream 10.0kb upstream 12674 true Chr5: 4937667-4950340 Arabidopsis thaliana
AT5G15240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4937667-4947666 Arabidopsis thaliana
AT5G15240 10.0kb downstream 10.0kb downstream 12674 true Chr5: 4947667-4960340 Arabidopsis thaliana
AT5G15240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4950341-4960340 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122373832 5261 Brassicaceae View MSA
123839572 5264 Brassicales-Malvales View MSA
124349563 5266 SBM View MSA
124249048 5268 Malvidae View MSA
124072696 5270 Rosid View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.373       Low
cufflinks 0.473        
cufflinks 0.949       High
cufflinks 0.68        
cufflinks 0.635        
cufflinks 0.752        

0 Strain