Gene : VDAC3 A. thaliana TAIR10
Primary Identifier:  ? AT5G15090 Defline:  (1 of 2) PTHR11743//PTHR11743:SF31 - VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL // SUBFAMILY NOT NAMED
Genomic Order:  1405 Name:  ? AT5G15090
Secondary Identifier:  ? PAC:19669146
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G15090 0.5kb upstream 0.5kb upstream 3140 true Chr5: 4888964-4892103 Arabidopsis thaliana
AT5G15090 0.5kb upstream 0.5kb upstream 500 false Chr5: 4891604-4892103 Arabidopsis thaliana
AT5G15090 0.5kb downstream 0.5kb downstream 3140 true Chr5: 4888464-4891603 Arabidopsis thaliana
AT5G15090 0.5kb downstream 0.5kb downstream 500 false Chr5: 4888464-4888963 Arabidopsis thaliana
AT5G15090 1.0kb upstream 1.0kb upstream 3640 true Chr5: 4888964-4892603 Arabidopsis thaliana
AT5G15090 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4891604-4892603 Arabidopsis thaliana
AT5G15090 1.0kb downstream 1.0kb downstream 3640 true Chr5: 4887964-4891603 Arabidopsis thaliana
AT5G15090 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4887964-4888963 Arabidopsis thaliana
AT5G15090 2.0kb upstream 2.0kb upstream 4640 true Chr5: 4888964-4893603 Arabidopsis thaliana
AT5G15090 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4891604-4893603 Arabidopsis thaliana
AT5G15090 2.0kb downstream 2.0kb downstream 4640 true Chr5: 4886964-4891603 Arabidopsis thaliana
AT5G15090 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4886964-4888963 Arabidopsis thaliana
AT5G15090 5.0kb upstream 5.0kb upstream 7640 true Chr5: 4888964-4896603 Arabidopsis thaliana
AT5G15090 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4891604-4896603 Arabidopsis thaliana
AT5G15090 5.0kb downstream 5.0kb downstream 7640 true Chr5: 4883964-4891603 Arabidopsis thaliana
AT5G15090 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4883964-4888963 Arabidopsis thaliana
AT5G15090 10.0kb upstream 10.0kb upstream 12640 true Chr5: 4888964-4901603 Arabidopsis thaliana
AT5G15090 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4891604-4901603 Arabidopsis thaliana
AT5G15090 10.0kb downstream 10.0kb downstream 12640 true Chr5: 4878964-4891603 Arabidopsis thaliana
AT5G15090 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4878964-4888963 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360432 5261 Brassicaceae View MSA
123797953 5264 Brassicales-Malvales View MSA
124350372 5266 SBM View MSA
124243906 5268 Malvidae View MSA
124071334 5270 Rosid View MSA
123743452 5271 Pentapetalae View MSA
122795321 5272 Eudicot View MSA
122042398 5273 Angiosperm View MSA
121349603 5274 Embryophyte View MSA
123426124 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.876        
cufflinks 17.665       Low
cufflinks 22.853        
cufflinks 23.15        
cufflinks 20.845        
cufflinks 24.521       High

0 Strain