Gene : AT5G14850 A. thaliana TAIR10
Defline:  (1 of 1) K05286 - phosphatidylinositol glycan, class B (PIGB) Genomic Order:  1379
Name:  ? AT5G14850 Secondary Identifier:  ? PAC:19671556
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14850 0.5kb upstream 0.5kb upstream 3594 true Chr5: 4801897-4805490 Arabidopsis thaliana
AT5G14850 0.5kb upstream 0.5kb upstream 500 false Chr5: 4804991-4805490 Arabidopsis thaliana
AT5G14850 0.5kb downstream 0.5kb downstream 3594 true Chr5: 4801397-4804990 Arabidopsis thaliana
AT5G14850 0.5kb downstream 0.5kb downstream 500 false Chr5: 4801397-4801896 Arabidopsis thaliana
AT5G14850 1.0kb upstream 1.0kb upstream 4094 true Chr5: 4801897-4805990 Arabidopsis thaliana
AT5G14850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4804991-4805990 Arabidopsis thaliana
AT5G14850 1.0kb downstream 1.0kb downstream 4094 true Chr5: 4800897-4804990 Arabidopsis thaliana
AT5G14850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4800897-4801896 Arabidopsis thaliana
AT5G14850 2.0kb upstream 2.0kb upstream 5094 true Chr5: 4801897-4806990 Arabidopsis thaliana
AT5G14850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4804991-4806990 Arabidopsis thaliana
AT5G14850 2.0kb downstream 2.0kb downstream 5094 true Chr5: 4799897-4804990 Arabidopsis thaliana
AT5G14850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4799897-4801896 Arabidopsis thaliana
AT5G14850 5.0kb upstream 5.0kb upstream 8094 true Chr5: 4801897-4809990 Arabidopsis thaliana
AT5G14850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4804991-4809990 Arabidopsis thaliana
AT5G14850 5.0kb downstream 5.0kb downstream 8094 true Chr5: 4796897-4804990 Arabidopsis thaliana
AT5G14850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4796897-4801896 Arabidopsis thaliana
AT5G14850 10.0kb upstream 10.0kb upstream 13094 true Chr5: 4801897-4814990 Arabidopsis thaliana
AT5G14850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4804991-4814990 Arabidopsis thaliana
AT5G14850 10.0kb downstream 10.0kb downstream 13094 true Chr5: 4791897-4804990 Arabidopsis thaliana
AT5G14850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4791897-4801896 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366815 5261 Brassicaceae View MSA
123833757 5264 Brassicales-Malvales View MSA
124342943 5266 SBM View MSA
124237026 5268 Malvidae View MSA
124065549 5270 Rosid View MSA
123737341 5271 Pentapetalae View MSA
122796897 5272 Eudicot View MSA
122042871 5273 Angiosperm View MSA
121346274 5274 Embryophyte View MSA
123425289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.289       Low
cufflinks 3.315        
cufflinks 2.372       Low
cufflinks 3.359        
cufflinks 2.622        
cufflinks 3.297        

0 Strain