Gene : AT5G14890 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13833//PTHR13833:SF41 - FAMILY NOT NAMED // NHL DOMAIN-CONTAINING PROTEIN Genomic Order:  1383
Name:  ? AT5G14890 Secondary Identifier:  ? PAC:19671347
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14890 0.5kb upstream 0.5kb upstream 4360 true Chr5: 4817449-4821808 Arabidopsis thaliana
AT5G14890 0.5kb upstream 0.5kb upstream 500 false Chr5: 4817449-4817948 Arabidopsis thaliana
AT5G14890 0.5kb downstream 0.5kb downstream 4360 true Chr5: 4817949-4822308 Arabidopsis thaliana
AT5G14890 0.5kb downstream 0.5kb downstream 500 false Chr5: 4821809-4822308 Arabidopsis thaliana
AT5G14890 1.0kb upstream 1.0kb upstream 4860 true Chr5: 4816949-4821808 Arabidopsis thaliana
AT5G14890 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4816949-4817948 Arabidopsis thaliana
AT5G14890 1.0kb downstream 1.0kb downstream 4860 true Chr5: 4817949-4822808 Arabidopsis thaliana
AT5G14890 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4821809-4822808 Arabidopsis thaliana
AT5G14890 2.0kb upstream 2.0kb upstream 5860 true Chr5: 4815949-4821808 Arabidopsis thaliana
AT5G14890 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4815949-4817948 Arabidopsis thaliana
AT5G14890 2.0kb downstream 2.0kb downstream 5860 true Chr5: 4817949-4823808 Arabidopsis thaliana
AT5G14890 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4821809-4823808 Arabidopsis thaliana
AT5G14890 5.0kb upstream 5.0kb upstream 8860 true Chr5: 4812949-4821808 Arabidopsis thaliana
AT5G14890 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4812949-4817948 Arabidopsis thaliana
AT5G14890 5.0kb downstream 5.0kb downstream 8860 true Chr5: 4817949-4826808 Arabidopsis thaliana
AT5G14890 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4821809-4826808 Arabidopsis thaliana
AT5G14890 10.0kb upstream 10.0kb upstream 13860 true Chr5: 4807949-4821808 Arabidopsis thaliana
AT5G14890 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4807949-4817948 Arabidopsis thaliana
AT5G14890 10.0kb downstream 10.0kb downstream 13860 true Chr5: 4817949-4831808 Arabidopsis thaliana
AT5G14890 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4821809-4831808 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381647 5261 Brassicaceae View MSA
123803355 5264 Brassicales-Malvales View MSA
124300471 5266 SBM View MSA
124151653 5268 Malvidae View MSA
124074290 5270 Rosid View MSA
123743156 5271 Pentapetalae View MSA
122793430 5272 Eudicot View MSA
122044384 5273 Angiosperm View MSA
121348645 5274 Embryophyte View MSA
123380956 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.332        
cufflinks 1.971        
cufflinks 0.333        
cufflinks 2.106       High
cufflinks 0.243     Low Low
cufflinks 1.635        

0 Strain