Gene : AT5G14540 A. thaliana TAIR10
Defline:  (1 of 3) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  1351
Name:  ? AT5G14540 Secondary Identifier:  ? PAC:19673124
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14540 0.5kb upstream 0.5kb upstream 3028 true Chr5: 4687147-4690174 Arabidopsis thaliana
AT5G14540 0.5kb upstream 0.5kb upstream 500 false Chr5: 4689675-4690174 Arabidopsis thaliana
AT5G14540 0.5kb downstream 0.5kb downstream 3028 true Chr5: 4686647-4689674 Arabidopsis thaliana
AT5G14540 0.5kb downstream 0.5kb downstream 500 false Chr5: 4686647-4687146 Arabidopsis thaliana
AT5G14540 1.0kb upstream 1.0kb upstream 3528 true Chr5: 4687147-4690674 Arabidopsis thaliana
AT5G14540 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4689675-4690674 Arabidopsis thaliana
AT5G14540 1.0kb downstream 1.0kb downstream 3528 true Chr5: 4686147-4689674 Arabidopsis thaliana
AT5G14540 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4686147-4687146 Arabidopsis thaliana
AT5G14540 2.0kb upstream 2.0kb upstream 4528 true Chr5: 4687147-4691674 Arabidopsis thaliana
AT5G14540 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4689675-4691674 Arabidopsis thaliana
AT5G14540 2.0kb downstream 2.0kb downstream 4528 true Chr5: 4685147-4689674 Arabidopsis thaliana
AT5G14540 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4685147-4687146 Arabidopsis thaliana
AT5G14540 5.0kb upstream 5.0kb upstream 7528 true Chr5: 4687147-4694674 Arabidopsis thaliana
AT5G14540 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4689675-4694674 Arabidopsis thaliana
AT5G14540 5.0kb downstream 5.0kb downstream 7528 true Chr5: 4682147-4689674 Arabidopsis thaliana
AT5G14540 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4682147-4687146 Arabidopsis thaliana
AT5G14540 10.0kb upstream 10.0kb upstream 12528 true Chr5: 4687147-4699674 Arabidopsis thaliana
AT5G14540 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4689675-4699674 Arabidopsis thaliana
AT5G14540 10.0kb downstream 10.0kb downstream 12528 true Chr5: 4677147-4689674 Arabidopsis thaliana
AT5G14540 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4677147-4687146 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378366 5261 Brassicaceae View MSA
123829411 5264 Brassicales-Malvales View MSA
124346083 5266 SBM View MSA
124245870 5268 Malvidae View MSA
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.122        
cufflinks 18.978        
cufflinks 15.204       Low
cufflinks 22.805        
cufflinks 17.852        
cufflinks 24.429       High

0 Strain