Gene : AT5G14320 A. thaliana TAIR10
Defline:  (1 of 2) K02952 - small subunit ribosomal protein S13 (RP-S13, rpsM) Genomic Order:  1328
Name:  ? AT5G14320 Secondary Identifier:  ? PAC:19672139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14320 0.5kb upstream 0.5kb upstream 1763 true Chr5: 4617650-4619412 Arabidopsis thaliana
AT5G14320 0.5kb upstream 0.5kb upstream 500 false Chr5: 4618913-4619412 Arabidopsis thaliana
AT5G14320 0.5kb downstream 0.5kb downstream 1763 true Chr5: 4617150-4618912 Arabidopsis thaliana
AT5G14320 0.5kb downstream 0.5kb downstream 500 false Chr5: 4617150-4617649 Arabidopsis thaliana
AT5G14320 1.0kb upstream 1.0kb upstream 2263 true Chr5: 4617650-4619912 Arabidopsis thaliana
AT5G14320 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4618913-4619912 Arabidopsis thaliana
AT5G14320 1.0kb downstream 1.0kb downstream 2263 true Chr5: 4616650-4618912 Arabidopsis thaliana
AT5G14320 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4616650-4617649 Arabidopsis thaliana
AT5G14320 2.0kb upstream 2.0kb upstream 3263 true Chr5: 4617650-4620912 Arabidopsis thaliana
AT5G14320 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4618913-4620912 Arabidopsis thaliana
AT5G14320 2.0kb downstream 2.0kb downstream 3263 true Chr5: 4615650-4618912 Arabidopsis thaliana
AT5G14320 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4615650-4617649 Arabidopsis thaliana
AT5G14320 5.0kb upstream 5.0kb upstream 6263 true Chr5: 4617650-4623912 Arabidopsis thaliana
AT5G14320 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4618913-4623912 Arabidopsis thaliana
AT5G14320 5.0kb downstream 5.0kb downstream 6263 true Chr5: 4612650-4618912 Arabidopsis thaliana
AT5G14320 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4612650-4617649 Arabidopsis thaliana
AT5G14320 10.0kb upstream 10.0kb upstream 11263 true Chr5: 4617650-4628912 Arabidopsis thaliana
AT5G14320 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4618913-4628912 Arabidopsis thaliana
AT5G14320 10.0kb downstream 10.0kb downstream 11263 true Chr5: 4607650-4618912 Arabidopsis thaliana
AT5G14320 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4607650-4617649 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379718 5261 Brassicaceae View MSA
123829451 5264 Brassicales-Malvales View MSA
124338296 5266 SBM View MSA
124247437 5268 Malvidae View MSA
124067573 5270 Rosid View MSA
123740403 5271 Pentapetalae View MSA
122788158 5272 Eudicot View MSA
122043008 5273 Angiosperm View MSA
121343902 5274 Embryophyte View MSA
123426379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 121.616     High  
cufflinks 6.488        
cufflinks 149.871     High  
cufflinks 6.17        
cufflinks 116.828     High  
cufflinks 4.328       Low

0 Strain