Gene : MYB40 A. thaliana TAIR10
Primary Identifier:  ? AT5G14340 Defline:  (1 of 1) PTHR10641//PTHR10641:SF509 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR
Genomic Order:  1330 Name:  ? AT5G14340
Secondary Identifier:  ? PAC:19670406
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14340 0.5kb upstream 0.5kb upstream 1981 true Chr5: 4622867-4624847 Arabidopsis thaliana
AT5G14340 0.5kb upstream 0.5kb upstream 500 false Chr5: 4622867-4623366 Arabidopsis thaliana
AT5G14340 0.5kb downstream 0.5kb downstream 1981 true Chr5: 4623367-4625347 Arabidopsis thaliana
AT5G14340 0.5kb downstream 0.5kb downstream 500 false Chr5: 4624848-4625347 Arabidopsis thaliana
AT5G14340 1.0kb upstream 1.0kb upstream 2481 true Chr5: 4622367-4624847 Arabidopsis thaliana
AT5G14340 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4622367-4623366 Arabidopsis thaliana
AT5G14340 1.0kb downstream 1.0kb downstream 2481 true Chr5: 4623367-4625847 Arabidopsis thaliana
AT5G14340 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4624848-4625847 Arabidopsis thaliana
AT5G14340 2.0kb upstream 2.0kb upstream 3481 true Chr5: 4621367-4624847 Arabidopsis thaliana
AT5G14340 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4621367-4623366 Arabidopsis thaliana
AT5G14340 2.0kb downstream 2.0kb downstream 3481 true Chr5: 4623367-4626847 Arabidopsis thaliana
AT5G14340 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4624848-4626847 Arabidopsis thaliana
AT5G14340 5.0kb upstream 5.0kb upstream 6481 true Chr5: 4618367-4624847 Arabidopsis thaliana
AT5G14340 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4618367-4623366 Arabidopsis thaliana
AT5G14340 5.0kb downstream 5.0kb downstream 6481 true Chr5: 4623367-4629847 Arabidopsis thaliana
AT5G14340 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4624848-4629847 Arabidopsis thaliana
AT5G14340 10.0kb upstream 10.0kb upstream 11481 true Chr5: 4613367-4624847 Arabidopsis thaliana
AT5G14340 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4613367-4623366 Arabidopsis thaliana
AT5G14340 10.0kb downstream 10.0kb downstream 11481 true Chr5: 4623367-4634847 Arabidopsis thaliana
AT5G14340 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4624848-4634847 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368320 5261 Brassicaceae View MSA
123835582 5264 Brassicales-Malvales View MSA
124339763 5266 SBM View MSA
124251484 5268 Malvidae View MSA
124067578 5270 Rosid View MSA
123746258 5271 Pentapetalae View MSA
122791607 5272 Eudicot View MSA
122049522 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.346       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.159        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.225        

0 Strain