Gene : BBM A. thaliana TAIR10
Primary Identifier:  ? AT5G17430 Defline:  (1 of 1) PTHR32467:SF8 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM
Genomic Order:  1653 Name:  ? AT5G17430
Secondary Identifier:  ? PAC:19667141
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17430 0.5kb upstream 0.5kb upstream 3527 true Chr5: 5742542-5746068 Arabidopsis thaliana
AT5G17430 0.5kb upstream 0.5kb upstream 500 false Chr5: 5745569-5746068 Arabidopsis thaliana
AT5G17430 0.5kb downstream 0.5kb downstream 3527 true Chr5: 5742042-5745568 Arabidopsis thaliana
AT5G17430 0.5kb downstream 0.5kb downstream 500 false Chr5: 5742042-5742541 Arabidopsis thaliana
AT5G17430 1.0kb upstream 1.0kb upstream 4027 true Chr5: 5742542-5746568 Arabidopsis thaliana
AT5G17430 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5745569-5746568 Arabidopsis thaliana
AT5G17430 1.0kb downstream 1.0kb downstream 4027 true Chr5: 5741542-5745568 Arabidopsis thaliana
AT5G17430 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5741542-5742541 Arabidopsis thaliana
AT5G17430 2.0kb upstream 2.0kb upstream 5027 true Chr5: 5742542-5747568 Arabidopsis thaliana
AT5G17430 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5745569-5747568 Arabidopsis thaliana
AT5G17430 2.0kb downstream 2.0kb downstream 5027 true Chr5: 5740542-5745568 Arabidopsis thaliana
AT5G17430 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5740542-5742541 Arabidopsis thaliana
AT5G17430 5.0kb upstream 5.0kb upstream 8027 true Chr5: 5742542-5750568 Arabidopsis thaliana
AT5G17430 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5745569-5750568 Arabidopsis thaliana
AT5G17430 5.0kb downstream 5.0kb downstream 8027 true Chr5: 5737542-5745568 Arabidopsis thaliana
AT5G17430 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5737542-5742541 Arabidopsis thaliana
AT5G17430 10.0kb upstream 10.0kb upstream 13027 true Chr5: 5742542-5755568 Arabidopsis thaliana
AT5G17430 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5745569-5755568 Arabidopsis thaliana
AT5G17430 10.0kb downstream 10.0kb downstream 13027 true Chr5: 5732542-5745568 Arabidopsis thaliana
AT5G17430 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5732542-5742541 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122368316 5261 Brassicaceae View MSA
123829352 5264 Brassicales-Malvales View MSA
124340297 5266 SBM View MSA
124247741 5268 Malvidae View MSA
124065940 5270 Rosid View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.087        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.105       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.951        

0 Strain