Gene : AT5G17380 A. thaliana TAIR10
Defline:  (1 of 1) 4.1.1.8 - Oxalyl-CoA decarboxylase / Oxalyl-CoA carboxy-lyase Genomic Order:  1648
Name:  ? AT5G17380 Secondary Identifier:  ? PAC:19668238
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17380 0.5kb upstream 0.5kb upstream 2488 true Chr5: 5724759-5727246 Arabidopsis thaliana
AT5G17380 0.5kb upstream 0.5kb upstream 500 false Chr5: 5726747-5727246 Arabidopsis thaliana
AT5G17380 0.5kb downstream 0.5kb downstream 2488 true Chr5: 5724259-5726746 Arabidopsis thaliana
AT5G17380 0.5kb downstream 0.5kb downstream 500 false Chr5: 5724259-5724758 Arabidopsis thaliana
AT5G17380 1.0kb upstream 1.0kb upstream 2988 true Chr5: 5724759-5727746 Arabidopsis thaliana
AT5G17380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5726747-5727746 Arabidopsis thaliana
AT5G17380 1.0kb downstream 1.0kb downstream 2988 true Chr5: 5723759-5726746 Arabidopsis thaliana
AT5G17380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5723759-5724758 Arabidopsis thaliana
AT5G17380 2.0kb upstream 2.0kb upstream 3988 true Chr5: 5724759-5728746 Arabidopsis thaliana
AT5G17380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5726747-5728746 Arabidopsis thaliana
AT5G17380 2.0kb downstream 2.0kb downstream 3988 true Chr5: 5722759-5726746 Arabidopsis thaliana
AT5G17380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5722759-5724758 Arabidopsis thaliana
AT5G17380 5.0kb upstream 5.0kb upstream 6988 true Chr5: 5724759-5731746 Arabidopsis thaliana
AT5G17380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5726747-5731746 Arabidopsis thaliana
AT5G17380 5.0kb downstream 5.0kb downstream 6988 true Chr5: 5719759-5726746 Arabidopsis thaliana
AT5G17380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5719759-5724758 Arabidopsis thaliana
AT5G17380 10.0kb upstream 10.0kb upstream 11988 true Chr5: 5724759-5736746 Arabidopsis thaliana
AT5G17380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5726747-5736746 Arabidopsis thaliana
AT5G17380 10.0kb downstream 10.0kb downstream 11988 true Chr5: 5714759-5726746 Arabidopsis thaliana
AT5G17380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5714759-5724758 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363795 5261 Brassicaceae View MSA
123828641 5264 Brassicales-Malvales View MSA
124342089 5266 SBM View MSA
124237225 5268 Malvidae View MSA
124060453 5270 Rosid View MSA
123740686 5271 Pentapetalae View MSA
122785766 5272 Eudicot View MSA
122041866 5273 Angiosperm View MSA
121347920 5274 Embryophyte View MSA
123423961 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.242     High  
cufflinks 26.806       Low
cufflinks 35.224     High  
cufflinks 38.679     High  
cufflinks 49.022     High High
cufflinks 28.546        

0 Strain