Gene : AT5G17160 A. thaliana TAIR10
Genomic Order:  1623 Name:  ? AT5G17160
Secondary Identifier:  ? PAC:19668824
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17160 0.5kb upstream 0.5kb upstream 3368 true Chr5: 5639646-5643013 Arabidopsis thaliana
AT5G17160 0.5kb upstream 0.5kb upstream 500 false Chr5: 5642514-5643013 Arabidopsis thaliana
AT5G17160 0.5kb downstream 0.5kb downstream 3368 true Chr5: 5639146-5642513 Arabidopsis thaliana
AT5G17160 0.5kb downstream 0.5kb downstream 500 false Chr5: 5639146-5639645 Arabidopsis thaliana
AT5G17160 1.0kb upstream 1.0kb upstream 3868 true Chr5: 5639646-5643513 Arabidopsis thaliana
AT5G17160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5642514-5643513 Arabidopsis thaliana
AT5G17160 1.0kb downstream 1.0kb downstream 3868 true Chr5: 5638646-5642513 Arabidopsis thaliana
AT5G17160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5638646-5639645 Arabidopsis thaliana
AT5G17160 2.0kb upstream 2.0kb upstream 4868 true Chr5: 5639646-5644513 Arabidopsis thaliana
AT5G17160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5642514-5644513 Arabidopsis thaliana
AT5G17160 2.0kb downstream 2.0kb downstream 4868 true Chr5: 5637646-5642513 Arabidopsis thaliana
AT5G17160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5637646-5639645 Arabidopsis thaliana
AT5G17160 5.0kb upstream 5.0kb upstream 7868 true Chr5: 5639646-5647513 Arabidopsis thaliana
AT5G17160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5642514-5647513 Arabidopsis thaliana
AT5G17160 5.0kb downstream 5.0kb downstream 7868 true Chr5: 5634646-5642513 Arabidopsis thaliana
AT5G17160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5634646-5639645 Arabidopsis thaliana
AT5G17160 10.0kb upstream 10.0kb upstream 12868 true Chr5: 5639646-5652513 Arabidopsis thaliana
AT5G17160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5642514-5652513 Arabidopsis thaliana
AT5G17160 10.0kb downstream 10.0kb downstream 12868 true Chr5: 5629646-5642513 Arabidopsis thaliana
AT5G17160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5629646-5639645 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380259 5261 Brassicaceae View MSA
123835638 5264 Brassicales-Malvales View MSA
124349709 5266 SBM View MSA
124250667 5268 Malvidae View MSA
124068263 5270 Rosid View MSA
123748135 5271 Pentapetalae View MSA
122789314 5272 Eudicot View MSA
122049048 5273 Angiosperm View MSA
121351117 5274 Embryophyte View MSA
123382012 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.575        
cufflinks 8.973        
cufflinks 2.495        
cufflinks 8.713        
cufflinks 1.596       Low
cufflinks 12.808       High

0 Strain