Gene : AT5G17190 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12701:SF12 - GB Genomic Order:  1627
Name:  ? AT5G17190 Secondary Identifier:  ? PAC:19667431
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17190 0.5kb upstream 0.5kb upstream 1266 true Chr5: 5651718-5652983 Arabidopsis thaliana
AT5G17190 0.5kb upstream 0.5kb upstream 500 false Chr5: 5651718-5652217 Arabidopsis thaliana
AT5G17190 0.5kb downstream 0.5kb downstream 1266 true Chr5: 5652218-5653483 Arabidopsis thaliana
AT5G17190 0.5kb downstream 0.5kb downstream 500 false Chr5: 5652984-5653483 Arabidopsis thaliana
AT5G17190 1.0kb upstream 1.0kb upstream 1766 true Chr5: 5651218-5652983 Arabidopsis thaliana
AT5G17190 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5651218-5652217 Arabidopsis thaliana
AT5G17190 1.0kb downstream 1.0kb downstream 1766 true Chr5: 5652218-5653983 Arabidopsis thaliana
AT5G17190 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5652984-5653983 Arabidopsis thaliana
AT5G17190 2.0kb upstream 2.0kb upstream 2766 true Chr5: 5650218-5652983 Arabidopsis thaliana
AT5G17190 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5650218-5652217 Arabidopsis thaliana
AT5G17190 2.0kb downstream 2.0kb downstream 2766 true Chr5: 5652218-5654983 Arabidopsis thaliana
AT5G17190 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5652984-5654983 Arabidopsis thaliana
AT5G17190 5.0kb upstream 5.0kb upstream 5766 true Chr5: 5647218-5652983 Arabidopsis thaliana
AT5G17190 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5647218-5652217 Arabidopsis thaliana
AT5G17190 5.0kb downstream 5.0kb downstream 5766 true Chr5: 5652218-5657983 Arabidopsis thaliana
AT5G17190 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5652984-5657983 Arabidopsis thaliana
AT5G17190 10.0kb upstream 10.0kb upstream 10766 true Chr5: 5642218-5652983 Arabidopsis thaliana
AT5G17190 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5642218-5652217 Arabidopsis thaliana
AT5G17190 10.0kb downstream 10.0kb downstream 10766 true Chr5: 5652218-5662983 Arabidopsis thaliana
AT5G17190 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5652984-5662983 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041316 5273 Angiosperm View MSA
122366454 5261 Brassicaceae View MSA
123835766 5264 Brassicales-Malvales View MSA
124337017 5266 SBM View MSA
124239124 5268 Malvidae View MSA
124062686 5270 Rosid View MSA
123746776 5271 Pentapetalae View MSA
122788736 5272 Eudicot View MSA
121348812 5274 Embryophyte View MSA
123381026 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.145     High  
cufflinks 150.258     High High
cufflinks 54.335     High Low
cufflinks 118.019     High  
cufflinks 60.616     High  
cufflinks 156.207     High High

0 Strain