Gene : AT5G16920 A. thaliana TAIR10
Defline:  Fasciclin-like arabinogalactan family protein Genomic Order:  1598
Name:  ? AT5G16920 Secondary Identifier:  ? PAC:19670529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G16920 0.5kb upstream 0.5kb upstream 1618 true Chr5: 5566511-5568128 Arabidopsis thaliana
AT5G16920 0.5kb upstream 0.5kb upstream 500 false Chr5: 5566511-5567010 Arabidopsis thaliana
AT5G16920 0.5kb downstream 0.5kb downstream 1618 true Chr5: 5567011-5568628 Arabidopsis thaliana
AT5G16920 0.5kb downstream 0.5kb downstream 500 false Chr5: 5568129-5568628 Arabidopsis thaliana
AT5G16920 1.0kb upstream 1.0kb upstream 2118 true Chr5: 5566011-5568128 Arabidopsis thaliana
AT5G16920 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5566011-5567010 Arabidopsis thaliana
AT5G16920 1.0kb downstream 1.0kb downstream 2118 true Chr5: 5567011-5569128 Arabidopsis thaliana
AT5G16920 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5568129-5569128 Arabidopsis thaliana
AT5G16920 2.0kb upstream 2.0kb upstream 3118 true Chr5: 5565011-5568128 Arabidopsis thaliana
AT5G16920 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5565011-5567010 Arabidopsis thaliana
AT5G16920 2.0kb downstream 2.0kb downstream 3118 true Chr5: 5567011-5570128 Arabidopsis thaliana
AT5G16920 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5568129-5570128 Arabidopsis thaliana
AT5G16920 5.0kb upstream 5.0kb upstream 6118 true Chr5: 5562011-5568128 Arabidopsis thaliana
AT5G16920 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5562011-5567010 Arabidopsis thaliana
AT5G16920 5.0kb downstream 5.0kb downstream 6118 true Chr5: 5567011-5573128 Arabidopsis thaliana
AT5G16920 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5568129-5573128 Arabidopsis thaliana
AT5G16920 10.0kb upstream 10.0kb upstream 11118 true Chr5: 5557011-5568128 Arabidopsis thaliana
AT5G16920 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5557011-5567010 Arabidopsis thaliana
AT5G16920 10.0kb downstream 10.0kb downstream 11118 true Chr5: 5567011-5578128 Arabidopsis thaliana
AT5G16920 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5568129-5578128 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366874 5261 Brassicaceae View MSA
123831134 5264 Brassicales-Malvales View MSA
124340601 5266 SBM View MSA
124244134 5268 Malvidae View MSA
124061934 5270 Rosid View MSA
123741142 5271 Pentapetalae View MSA
122796491 5272 Eudicot View MSA
122049594 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.435        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.074     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.237     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain